More than 300 homologs were found in PanDaTox collection
for query gene Rmet_1852 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_4948  acyl-CoA dehydrogenase domain-containing protein  55.41 
 
 
600 aa  653    Pseudomonas putida KT2440  Bacteria  normal  0.669366  normal 
 
 
-
 
NC_009439  Pmen_0561  acyl-CoA dehydrogenase domain-containing protein  55.65 
 
 
622 aa  672    Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.00000000252916 
 
 
-
 
NC_003295  RSc1762  acyl-CoA dehydrogenase oxidoreductase protein  80.26 
 
 
625 aa  1039    Ralstonia solanacearum GMI1000  Bacteria  normal  0.492096  normal  0.209412 
 
 
-
 
NC_010501  PputW619_0517  acyl-CoA dehydrogenase domain-containing protein  56.38 
 
 
600 aa  672    Pseudomonas putida W619  Bacteria  normal  0.0563795  normal  0.38064 
 
 
-
 
NC_008542  Bcen2424_1341  acyl-CoA dehydrogenase domain-containing protein  69.03 
 
 
609 aa  862    Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0100  acyl-CoA dehydrogenase domain-containing protein  63.11 
 
 
588 aa  758    Mycobacterium sp. JLS  Bacteria  normal  normal  0.119602 
 
 
-
 
NC_012856  Rpic12D_1485  acyl-CoA dehydrogenase domain protein  80.1 
 
 
622 aa  1039    Ralstonia pickettii 12D  Bacteria  normal  0.275641  normal  0.0574258 
 
 
-
 
NC_010508  Bcenmc03_1320  acyl-CoA dehydrogenase domain-containing protein  69.19 
 
 
609 aa  882    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.895638 
 
 
-
 
NC_004578  PSPTO_5020  acyl-CoA dehydrogenase family protein  56.06 
 
 
600 aa  666    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0505  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  56.38 
 
 
600 aa  670    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3315  acyl-CoA dehydrogenase domain-containing protein  57.23 
 
 
645 aa  692    Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00913148 
 
 
-
 
NC_014210  Ndas_1582  acyl-CoA dehydrogenase domain protein  63.68 
 
 
598 aa  738    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.900007  decreased coverage  0.00956274 
 
 
-
 
NC_007347  Reut_A1408  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  86.45 
 
 
618 aa  1113    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1777  putative acyl-CoA dehydrogenase  61.39 
 
 
617 aa  729    Methylibium petroleiphilum PM1  Bacteria  normal  0.130183  normal  0.0640101 
 
 
-
 
NC_007492  Pfl01_0451  Acyl-CoA dehydrogenase-like  55.09 
 
 
600 aa  659    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.821544  normal 
 
 
-
 
NC_008782  Ajs_1687  acyl-CoA dehydrogenase domain-containing protein  57.32 
 
 
642 aa  698    Acidovorax sp. JS42  Bacteria  normal  normal  0.291033 
 
 
-
 
NC_007509  Bcep18194_C7558  Acyl-CoA dehydrogenase  58.9 
 
 
607 aa  714    Burkholderia sp. 383  Bacteria  normal  0.0382442  normal  0.166512 
 
 
-
 
NC_008752  Aave_2877  acyl-CoA dehydrogenase domain-containing protein  55.75 
 
 
652 aa  690    Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A4473  Acyl-CoA dehydrogenase  69.03 
 
 
609 aa  880    Burkholderia sp. 383  Bacteria  normal  0.398734  normal 
 
 
-
 
NC_013946  Mrub_2720  acyl-CoA dehydrogenase domain-containing protein  54.98 
 
 
592 aa  635    Meiothermus ruber DSM 1279  Bacteria  normal  0.78242  normal 
 
 
-
 
NC_013510  Tcur_1227  acyl-CoA dehydrogenase domain protein  67.04 
 
 
599 aa  820    Thermomonospora curvata DSM 43183  Bacteria  normal  0.556988  n/a   
 
 
-
 
NC_011992  Dtpsy_2017  acyl-CoA dehydrogenase domain protein  57.64 
 
 
619 aa  702    Acidovorax ebreus TPSY  Bacteria  normal  0.875107  n/a   
 
 
-
 
NC_010682  Rpic_1444  acyl-CoA dehydrogenase domain protein  80.42 
 
 
622 aa  1044    Ralstonia pickettii 12J  Bacteria  normal  normal  0.0386828 
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  58.23 
 
 
601 aa  685    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_013757  Gobs_4675  acyl-CoA dehydrogenase domain protein  64.62 
 
 
597 aa  764    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2384  acyl-CoA dehydrogenase-like  58.31 
 
 
618 aa  686    Rhodoferax ferrireducens T118  Bacteria  normal  0.225519  n/a   
 
 
-
 
NC_008463  PA14_66350  putative acyl-CoA dehydrogenase  57.03 
 
 
600 aa  692    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2570  acyl-CoA dehydrogenase-like  58.96 
 
 
627 aa  726    Polaromonas sp. JS666  Bacteria  normal  0.215249  normal  0.667801 
 
 
-
 
NC_012791  Vapar_2922  acyl-CoA dehydrogenase domain protein  59.58 
 
 
617 aa  701    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1852  acyl-CoA dehydrogenase-like protein  100 
 
 
619 aa  1283    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.232086 
 
 
-
 
NC_008060  Bcen_0860  acyl-CoA dehydrogenase-like  69.03 
 
 
609 aa  862    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0119  acyl-CoA dehydrogenase domain-containing protein  63.43 
 
 
588 aa  763    Mycobacterium sp. KMS  Bacteria  normal  normal  0.0234574 
 
 
-
 
NC_008146  Mmcs_0110  acyl-CoA dehydrogenase-like protein  63.43 
 
 
588 aa  763    Mycobacterium sp. MCS  Bacteria  normal  0.242894  n/a   
 
 
-
 
NC_010551  BamMC406_1258  acyl-CoA dehydrogenase domain-containing protein  68.87 
 
 
609 aa  853    Burkholderia ambifaria MC40-6  Bacteria  normal  0.594087  normal 
 
 
-
 
NC_009656  PSPA7_5757  putative acyl-CoA dehydrogenase  57.03 
 
 
600 aa  692    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1233  acyl-CoA dehydrogenase domain-containing protein  69.03 
 
 
609 aa  859    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3567  acyl-CoA dehydrogenase domain protein  59.35 
 
 
591 aa  725    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4821  acyl-CoA dehydrogenase domain-containing protein  56.54 
 
 
600 aa  667    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4997  acyl-CoA dehydrogenase domain-containing protein  55.41 
 
 
600 aa  653    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0702  acyl-CoA dehydrogenase domain protein  53.81 
 
 
606 aa  630  1e-179  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2405  acyl-CoA dehydrogenase-like  55.14 
 
 
598 aa  624  1e-177  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2868  acyl-CoA dehydrogenase domain-containing protein  53.14 
 
 
602 aa  620  1e-176  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1853  acyl-CoA dehydrogenase domain-containing protein  54.17 
 
 
608 aa  619  1e-176  Nocardioides sp. JS614  Bacteria  normal  0.771828  n/a   
 
 
-
 
NC_008786  Veis_1790  acyl-CoA dehydrogenase domain-containing protein  59.69 
 
 
563 aa  612  9.999999999999999e-175  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2845  acyl-CoA dehydrogenase domain-containing protein  49.84 
 
 
600 aa  581  1e-164  Marinobacter aquaeolei VT8  Bacteria  normal  0.26253  n/a   
 
 
-
 
NC_008345  Sfri_2066  acyl-CoA dehydrogenase domain-containing protein  48.87 
 
 
601 aa  576  1.0000000000000001e-163  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2141  acyl-CoA dehydrogenase-like  49.51 
 
 
616 aa  574  1.0000000000000001e-162  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01005  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.55 
 
 
611 aa  553  1e-156  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  49.03 
 
 
599 aa  542  1e-153  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_009524  PsycPRwf_1004  acyl-CoA dehydrogenase domain-containing protein  46.79 
 
 
601 aa  525  1e-147  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000430658 
 
 
-
 
NC_007969  Pcryo_0861  acyl-CoA dehydrogenase-like  46.28 
 
 
601 aa  515  1.0000000000000001e-145  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1076  acyl-CoA dehydrogenase domain protein  43.74 
 
 
606 aa  436  1e-121  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.276449 
 
 
-
 
NC_013440  Hoch_4640  acyl-CoA dehydrogenase domain protein  40.74 
 
 
599 aa  424  1e-117  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  38.77 
 
 
601 aa  405  1e-111  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  37.8 
 
 
605 aa  391  1e-107  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  40.4 
 
 
598 aa  380  1e-104  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  40.4 
 
 
598 aa  382  1e-104  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  37.08 
 
 
594 aa  371  1e-101  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  38.42 
 
 
592 aa  367  1e-100  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  38.42 
 
 
592 aa  367  1e-100  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  37.84 
 
 
598 aa  365  1e-99  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  38.15 
 
 
592 aa  365  2e-99  Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  38.28 
 
 
598 aa  363  4e-99  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  37.82 
 
 
592 aa  363  6e-99  Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.38 
 
 
598 aa  362  1e-98  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  37.82 
 
 
592 aa  362  1e-98  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  36.3 
 
 
595 aa  361  2e-98  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  37.52 
 
 
603 aa  361  2e-98  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0839  acyl-CoA dehydrogenase domain protein  37.81 
 
 
592 aa  361  2e-98  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.704355 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  37.66 
 
 
597 aa  360  5e-98  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_007912  Sde_1885  putative acyl-CoA dehydrogenase  36.99 
 
 
595 aa  360  5e-98  Saccharophagus degradans 2-40  Bacteria  normal  0.137162  normal 
 
 
-
 
NC_008554  Sfum_1402  acyl-CoA dehydrogenase domain-containing protein  36.46 
 
 
619 aa  358  9.999999999999999e-98  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.55208 
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  37.75 
 
 
592 aa  358  9.999999999999999e-98  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01173  acyl-CoA dehydrogenase  37.77 
 
 
597 aa  357  2.9999999999999997e-97  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.520854  n/a   
 
 
-
 
NC_004578  PSPTO_0506  acyl-CoA dehydrogenase family protein  37.58 
 
 
592 aa  357  3.9999999999999996e-97  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  36.57 
 
 
595 aa  357  3.9999999999999996e-97  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  36.42 
 
 
598 aa  357  5e-97  Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  37.1 
 
 
586 aa  357  5e-97  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  37.42 
 
 
596 aa  356  7.999999999999999e-97  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_012560  Avin_45920  acyl-CoA dehydrogenase  37.81 
 
 
601 aa  355  1e-96  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1452  acyl-CoA dehydrogenase-like  35.37 
 
 
597 aa  355  1e-96  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
595 aa  355  2e-96  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
595 aa  355  2e-96  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
595 aa  355  2e-96  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
595 aa  355  2e-96  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2777  acyl-CoA dehydrogenase domain protein  37.07 
 
 
596 aa  354  2.9999999999999997e-96  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.932954  normal 
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  36.51 
 
 
595 aa  354  2.9999999999999997e-96  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  36.29 
 
 
595 aa  354  2.9999999999999997e-96  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  36.51 
 
 
595 aa  354  2.9999999999999997e-96  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  36.51 
 
 
595 aa  354  2.9999999999999997e-96  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  35.97 
 
 
595 aa  353  5e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  35.97 
 
 
595 aa  353  5e-96  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  35.97 
 
 
595 aa  353  5e-96  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  36.91 
 
 
592 aa  353  7e-96  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  36.35 
 
 
595 aa  352  8e-96  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4476  acyl-CoA dehydrogenase family protein  36.35 
 
 
602 aa  352  1e-95  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4677  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  37.35 
 
 
592 aa  352  1e-95  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0983724  normal 
 
 
-
 
NC_008740  Maqu_3891  acyl-CoA dehydrogenase domain-containing protein  36.76 
 
 
606 aa  352  1e-95  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  35.97 
 
 
595 aa  351  2e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  36.91 
 
 
592 aa  351  2e-95  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
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