Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_1227 |
Symbol | |
ID | 8602537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | + |
Start bp | 1387249 |
End bp | 1389048 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003298848 |
Protein GI | 269125478 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.556988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCTCCT TGCTGTTGTC CCGTCGCGAC CTCGACTTTC TGCTGCACGA GTGGCTCGAC GTCACCCGCC TGACCGCCCG CAAGCGTTTC GCCGAGCACT CCCGGGAGAC CTTCGATGCG GTGCTGGAGC TCGGTGAGCG GATCGCCACC GACCACTTCG CCCCGCACAA CAAGCTCGCC GACGCCCACG AGCCGCACCT GGACGCCGAC GGCAGGGTGG TGATGATCCC GGAGGTGAAG CGGGCGCTGC GGGTCTTCGC CGAGGCGGGC CTGCTGGCCG GGGAGCTGGA CGAGTCGCTG GGCGGGATGC AGCTGCCCAC CGTGGTGTCC AAGGCGGTGC TGGCCTGGTT CCAGGCGGCC AACGTCGGCA CCGCCGCCTA CCCCTTCCTC ACCATCGCCA ACGCCAACCT GCTGGTCGAG TACGGCACCC CCGAGCAGGT GGACACCTGG GTGCGGCCGA TGGCGGCCGG GCGGTTCCTG GGCACCATGT GCCTGTCGGA GCCGCAGGCC GGCTCGTCCC TGGCCGACAT CGCCACCCGC GCCGAGCCGC AGCCGGACGG CACCTACCGC CTCTACGGCA CCAAGATGTG GATCTCGGCC GGCGAGCACG AGCTGAGCGA GAACATCGTC CACCTGGTGC TGGCCAAGAT CCCCGGCGGG CCGCCCGGGG TGAAGGGCAT CTCGCTGTTC ATCGTCCCCA AGGTGCTGGT GAACGCCGAC GGCTCGCTGG GGGAGCGCAA CGACATCGCC CTGGTGGGCC TCAACCACAA GATGGGTTAT CGCGGCACCG TCAACACGGT GCTGAACTTC GGGGAGGGCG CCCACACCCC CGGCGGCGCG CCCGGCGCTG TGGGGTACCT GGTCGGCGAG CCCCACAAGG GGCTGTCGTA CATGTTCCAC ATGATGAACG AGGCGCGCAT CGGGGTCGGC CTGGGCGCCG CCGCGCTGGG CTACACCGGC TACCTGCACT CCCTGGAGTA CGCCAAGGTC CGCCTGCAGG GCCGTCCGCC CGCCGCCAAG GACCCCGCGC TCCCGCCGGT GCCGCTGATC GAGCACGCCG ACGTGCGGCG GATGCTGCTG GCCCAGAAGG CCTACGTCGA GGGCGCCCTG GCCTTGGGCC TGTACTGCAG CCTGCTGGTG GACGACAGCA AGACCGCCGA GGACGCGGTG GCCCGCGACC GGGCCGCGCT GCTGCTGGAC GTGCTCACCC CGATCGCCAA GAGCTGGCCG TCGCAGTGGT GCCTGGAGGC CAACTCCCTG GCCATTCAGG TGCACGGCGG GTACGGCTAC ACCCGCGAGT ACAACGTGGA GCAGTTCTAC CGGGACAACC GGCTCAACCC CATCCACGAG GGCACCCACG GCATCCAGGG GCTGGACCTG CTGGGCCGCA AGGTCGTCAT GAAGAACGGC ATGGGGCTGC GGGTGCTGGG CGAGACGATC TCGGCCACCG TCCAGTGCGC CATTGACCTG GGCGGCGAGA CGGCCGAGAT GGGCCGGGCG CTTCAGGACG CCTTCGAACG CCTGACCCTG GTCACGGCGC AGCTGTGGAG CGCGGGGGAC CCGGCGGTCA CGCTCGCCAA CTCCTCGATC TACCTGGAGG CGGCCGGGCA CATCGTGGTG GCCTGGATCT GGCTGGAGCA GGTGCTGGCC GCCCACGGCA AGGACGGCCC CTTCTATGCG GGCAAGCGGC AGGCGGCGCG GTACTTCTTC CGCTACGAGC TGCCCAAGAC CGGCCCCCAG CTGGACCTGC TGGGCTCCCT GGACCGCACC ACGCTGGAGA TGGACCCCTC CTGGTTCTGA
|
Protein sequence | MSSLLLSRRD LDFLLHEWLD VTRLTARKRF AEHSRETFDA VLELGERIAT DHFAPHNKLA DAHEPHLDAD GRVVMIPEVK RALRVFAEAG LLAGELDESL GGMQLPTVVS KAVLAWFQAA NVGTAAYPFL TIANANLLVE YGTPEQVDTW VRPMAAGRFL GTMCLSEPQA GSSLADIATR AEPQPDGTYR LYGTKMWISA GEHELSENIV HLVLAKIPGG PPGVKGISLF IVPKVLVNAD GSLGERNDIA LVGLNHKMGY RGTVNTVLNF GEGAHTPGGA PGAVGYLVGE PHKGLSYMFH MMNEARIGVG LGAAALGYTG YLHSLEYAKV RLQGRPPAAK DPALPPVPLI EHADVRRMLL AQKAYVEGAL ALGLYCSLLV DDSKTAEDAV ARDRAALLLD VLTPIAKSWP SQWCLEANSL AIQVHGGYGY TREYNVEQFY RDNRLNPIHE GTHGIQGLDL LGRKVVMKNG MGLRVLGETI SATVQCAIDL GGETAEMGRA LQDAFERLTL VTAQLWSAGD PAVTLANSSI YLEAAGHIVV AWIWLEQVLA AHGKDGPFYA GKRQAARYFF RYELPKTGPQ LDLLGSLDRT TLEMDPSWF
|
| |