More than 300 homologs were found in PanDaTox collection
for query gene Pput_4821 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_01005  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  55.07 
 
 
611 aa  654    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4948  acyl-CoA dehydrogenase domain-containing protein  98 
 
 
600 aa  1214    Pseudomonas putida KT2440  Bacteria  normal  0.669366  normal 
 
 
-
 
NC_003295  RSc1762  acyl-CoA dehydrogenase oxidoreductase protein  57.01 
 
 
625 aa  667    Ralstonia solanacearum GMI1000  Bacteria  normal  0.492096  normal  0.209412 
 
 
-
 
NC_004578  PSPTO_5020  acyl-CoA dehydrogenase family protein  81.17 
 
 
600 aa  1011    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0505  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  82 
 
 
600 aa  1023    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1485  acyl-CoA dehydrogenase domain protein  55.75 
 
 
622 aa  665    Ralstonia pickettii 12D  Bacteria  normal  0.275641  normal  0.0574258 
 
 
-
 
NC_008463  PA14_66350  putative acyl-CoA dehydrogenase  82 
 
 
600 aa  1016    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4821  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
600 aa  1238    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1408  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  56.15 
 
 
618 aa  651    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0451  Acyl-CoA dehydrogenase-like  82 
 
 
600 aa  1017    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.821544  normal 
 
 
-
 
NC_010322  PputGB1_4997  acyl-CoA dehydrogenase domain-containing protein  94.83 
 
 
600 aa  1181    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  60.97 
 
 
601 aa  726    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_013510  Tcur_1227  acyl-CoA dehydrogenase domain protein  57.45 
 
 
599 aa  659    Thermomonospora curvata DSM 43183  Bacteria  normal  0.556988  n/a   
 
 
-
 
NC_008705  Mkms_0119  acyl-CoA dehydrogenase domain-containing protein  55.76 
 
 
588 aa  637    Mycobacterium sp. KMS  Bacteria  normal  normal  0.0234574 
 
 
-
 
NC_010682  Rpic_1444  acyl-CoA dehydrogenase domain protein  56 
 
 
622 aa  672    Ralstonia pickettii 12J  Bacteria  normal  normal  0.0386828 
 
 
-
 
NC_008740  Maqu_2845  acyl-CoA dehydrogenase domain-containing protein  58.42 
 
 
600 aa  708    Marinobacter aquaeolei VT8  Bacteria  normal  0.26253  n/a   
 
 
-
 
NC_010501  PputW619_0517  acyl-CoA dehydrogenase domain-containing protein  93.83 
 
 
600 aa  1157    Pseudomonas putida W619  Bacteria  normal  0.0563795  normal  0.38064 
 
 
-
 
NC_013757  Gobs_4675  acyl-CoA dehydrogenase domain protein  59.04 
 
 
597 aa  675    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5757  putative acyl-CoA dehydrogenase  81.83 
 
 
600 aa  1017    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1852  acyl-CoA dehydrogenase-like protein  56.54 
 
 
619 aa  640    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.232086 
 
 
-
 
NC_008010  Dgeo_2405  acyl-CoA dehydrogenase-like  57.38 
 
 
598 aa  658    Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0110  acyl-CoA dehydrogenase-like protein  55.76 
 
 
588 aa  637    Mycobacterium sp. MCS  Bacteria  normal  0.242894  n/a   
 
 
-
 
NC_008228  Patl_2141  acyl-CoA dehydrogenase-like  54.82 
 
 
616 aa  671    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2868  acyl-CoA dehydrogenase domain-containing protein  58.87 
 
 
602 aa  695    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0561  acyl-CoA dehydrogenase domain-containing protein  77.87 
 
 
622 aa  973    Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.00000000252916 
 
 
-
 
NC_009077  Mjls_0100  acyl-CoA dehydrogenase domain-containing protein  55.43 
 
 
588 aa  632  1e-180  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119602 
 
 
-
 
NC_009524  PsycPRwf_1004  acyl-CoA dehydrogenase domain-containing protein  52.65 
 
 
601 aa  621  1e-176  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000430658 
 
 
-
 
NC_010508  Bcenmc03_1320  acyl-CoA dehydrogenase domain-containing protein  54.87 
 
 
609 aa  619  1e-176  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.895638 
 
 
-
 
NC_008345  Sfri_2066  acyl-CoA dehydrogenase domain-containing protein  51.25 
 
 
601 aa  618  1e-176  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4473  Acyl-CoA dehydrogenase  55.03 
 
 
609 aa  616  1e-175  Burkholderia sp. 383  Bacteria  normal  0.398734  normal 
 
 
-
 
NC_013441  Gbro_3567  acyl-CoA dehydrogenase domain protein  55.04 
 
 
591 aa  612  9.999999999999999e-175  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1258  acyl-CoA dehydrogenase domain-containing protein  54.87 
 
 
609 aa  605  9.999999999999999e-173  Burkholderia ambifaria MC40-6  Bacteria  normal  0.594087  normal 
 
 
-
 
NC_008542  Bcen2424_1341  acyl-CoA dehydrogenase domain-containing protein  54.87 
 
 
609 aa  605  9.999999999999999e-173  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0860  acyl-CoA dehydrogenase-like  54.87 
 
 
609 aa  605  9.999999999999999e-173  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0861  acyl-CoA dehydrogenase-like  53.09 
 
 
601 aa  602  1.0000000000000001e-171  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1233  acyl-CoA dehydrogenase domain-containing protein  54.55 
 
 
609 aa  599  1e-170  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2720  acyl-CoA dehydrogenase domain-containing protein  52.33 
 
 
592 aa  601  1e-170  Meiothermus ruber DSM 1279  Bacteria  normal  0.78242  normal 
 
 
-
 
NC_014210  Ndas_1582  acyl-CoA dehydrogenase domain protein  55 
 
 
598 aa  598  1e-169  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.900007  decreased coverage  0.00956274 
 
 
-
 
NC_014158  Tpau_0702  acyl-CoA dehydrogenase domain protein  54 
 
 
606 aa  593  1e-168  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7558  Acyl-CoA dehydrogenase  50.9 
 
 
607 aa  570  1e-161  Burkholderia sp. 383  Bacteria  normal  0.0382442  normal  0.166512 
 
 
-
 
NC_008825  Mpe_A1777  putative acyl-CoA dehydrogenase  51.81 
 
 
617 aa  555  1e-157  Methylibium petroleiphilum PM1  Bacteria  normal  0.130183  normal  0.0640101 
 
 
-
 
NC_007948  Bpro_2570  acyl-CoA dehydrogenase-like  49.61 
 
 
627 aa  539  9.999999999999999e-153  Polaromonas sp. JS666  Bacteria  normal  0.215249  normal  0.667801 
 
 
-
 
NC_012791  Vapar_2922  acyl-CoA dehydrogenase domain protein  49.84 
 
 
617 aa  538  1e-151  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  50.25 
 
 
599 aa  537  1e-151  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_011992  Dtpsy_2017  acyl-CoA dehydrogenase domain protein  49.11 
 
 
619 aa  533  1e-150  Acidovorax ebreus TPSY  Bacteria  normal  0.875107  n/a   
 
 
-
 
NC_010002  Daci_3315  acyl-CoA dehydrogenase domain-containing protein  49.2 
 
 
645 aa  530  1e-149  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00913148 
 
 
-
 
NC_008782  Ajs_1687  acyl-CoA dehydrogenase domain-containing protein  49.36 
 
 
642 aa  529  1e-149  Acidovorax sp. JS42  Bacteria  normal  normal  0.291033 
 
 
-
 
NC_008752  Aave_2877  acyl-CoA dehydrogenase domain-containing protein  48.58 
 
 
652 aa  525  1e-148  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2384  acyl-CoA dehydrogenase-like  49.68 
 
 
618 aa  520  1e-146  Rhodoferax ferrireducens T118  Bacteria  normal  0.225519  n/a   
 
 
-
 
NC_008699  Noca_1853  acyl-CoA dehydrogenase domain-containing protein  47.6 
 
 
608 aa  486  1e-136  Nocardioides sp. JS614  Bacteria  normal  0.771828  n/a   
 
 
-
 
NC_013440  Hoch_4640  acyl-CoA dehydrogenase domain protein  45.68 
 
 
599 aa  474  1e-132  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1790  acyl-CoA dehydrogenase domain-containing protein  52.45 
 
 
563 aa  470  1.0000000000000001e-131  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1076  acyl-CoA dehydrogenase domain protein  45.13 
 
 
606 aa  464  1e-129  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.276449 
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
605 aa  410  1e-113  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  38.44 
 
 
601 aa  412  1e-113  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  39.43 
 
 
595 aa  402  9.999999999999999e-111  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  39.16 
 
 
594 aa  401  9.999999999999999e-111  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  39.43 
 
 
595 aa  402  9.999999999999999e-111  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  39.09 
 
 
595 aa  399  9.999999999999999e-111  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  39.26 
 
 
595 aa  400  9.999999999999999e-111  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  39.09 
 
 
595 aa  399  9.999999999999999e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  39.77 
 
 
595 aa  401  9.999999999999999e-111  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  39.43 
 
 
595 aa  402  9.999999999999999e-111  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  40.73 
 
 
595 aa  399  9.999999999999999e-111  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  39.43 
 
 
595 aa  402  9.999999999999999e-111  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  39.09 
 
 
595 aa  399  9.999999999999999e-111  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  41.33 
 
 
595 aa  395  1e-109  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  40.61 
 
 
601 aa  393  1e-108  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  41.61 
 
 
596 aa  394  1e-108  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  39.26 
 
 
595 aa  393  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  38.93 
 
 
599 aa  394  1e-108  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  41.07 
 
 
598 aa  394  1e-108  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  41.08 
 
 
595 aa  394  1e-108  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  39.26 
 
 
595 aa  393  1e-108  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  40.55 
 
 
598 aa  395  1e-108  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  40.56 
 
 
595 aa  394  1e-108  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  39.26 
 
 
595 aa  393  1e-108  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  37.98 
 
 
594 aa  392  1e-107  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  39.59 
 
 
598 aa  391  1e-107  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  39.41 
 
 
598 aa  385  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  38.99 
 
 
596 aa  386  1e-106  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_009943  Dole_1305  acyl-CoA dehydrogenase domain-containing protein  37.24 
 
 
604 aa  388  1e-106  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000712718  n/a   
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  40.48 
 
 
598 aa  389  1e-106  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  36.96 
 
 
598 aa  387  1e-106  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  38.42 
 
 
595 aa  385  1e-105  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  40.85 
 
 
592 aa  385  1e-105  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  37.46 
 
 
596 aa  384  1e-105  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  39.4 
 
 
594 aa  385  1e-105  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  38.42 
 
 
595 aa  383  1e-105  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  38.32 
 
 
595 aa  384  1e-105  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  39.51 
 
 
595 aa  382  1e-104  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  39.15 
 
 
598 aa  380  1e-104  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_011992  Dtpsy_0571  acyl-CoA dehydrogenase domain protein  38.74 
 
 
598 aa  380  1e-104  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  39.18 
 
 
596 aa  379  1e-104  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  39.03 
 
 
598 aa  382  1e-104  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_007517  Gmet_2211  Acyl-CoA dehydrogenase-like  36.89 
 
 
615 aa  382  1e-104  Geobacter metallireducens GS-15  Bacteria  normal  0.0172956  normal  0.0102784 
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  39.18 
 
 
596 aa  380  1e-104  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  39.18 
 
 
596 aa  380  1e-104  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_4032  acyl-CoA dehydrogenase domain-containing protein  39.83 
 
 
596 aa  375  1e-103  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000200788 
 
 
-
 
NC_007912  Sde_1885  putative acyl-CoA dehydrogenase  38.94 
 
 
595 aa  377  1e-103  Saccharophagus degradans 2-40  Bacteria  normal  0.137162  normal 
 
 
-
 
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