| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5757 |
|---|
| Symbol | |
|---|
| ID | 5357955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5938453 |
|---|
| End bp | 5940255 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640814802 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001351076 |
|---|
| Protein GI | 152984092 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAA CCCTGCTCAG TTCCCGCAAC CTGGCGTTCG AGCTGTATGA AGTCCTCGAT
GCCGAAGCCC TGACCCAGCG CCCGCGCTTC GCCGAACATA GCCGCGAAAC CTTCGACGCC
GCGCTCGGCA CCGCGCGGAG CCTGGCGGAA AAGCTGTTCG CCCCGCACAA CCGCAAGGGC
GACGAACACG AGCCGCTCTA TGAGAATGGC TCAGCCACGC TGATTCCGGA AGTGAAGCCG
GCGGTGGATG CCTTCCTCGA CGCCGGCTTC CTCAACGCCA CCCGCAGCTT CGAGCAAGGC
GGCATGCAGT TGCCGACCCT GCTGTCGCAG GCCTGCTTCG CCCACTTCCA GGCGGCCAAC
GTCGGTAGCT CGGCCTATCC GTTCCTGACC ATGGGCGCCG CCAACCTGAT CGAGAGCTTC
GGCAGCGAGG AGCAGAAGCA GCGCTTCCTG CAACCGATGA TCGAGGGCCG CTTCTTCGGC
ACCATGGCCC TCACCGAACC GCACGCCGGC TCCTCCCTCT CCGACATCCG CACCCGCGCC
GAAGCGGCCG CCGACGGCAG CTATCGGATC AGGGGCAACA AGATCTTCAT CTCCGGCGGC
GACCACCCGC TGTCCGAGAA CATCGTACAC ATGGTCCTGG CCAAGCTGCC GGACGCTCCG
CCCGGGGTGA AAGGCATCTC GCTGTTCATC GTGCCGAAGT TCCTGGTCAA CGCCGACGGC
AGCCTCGGAC CGCGCAACGA TGTGATCCTC GCCGGCCTGT TCCACAAGAT GGGCTATCGC
GGCACCACCT CCACCGCGCT GAACTTCGGC GACAACGGCG CCTGCGTCGG CTACCTGGTG
GGCAAGCCGC ACCAGGGCCT GGCCTACATG TTCCAGATGA TGAACGAGGC GCGCATCGGC
GTCGGCATGG GCGCGGTGAT GCTCGGCTAC GCCGGCTACC TCTACTCCCT CGAATACGCC
CGCGAACGCC CGCAGGGTCG CCTGCCGGAC GGCAAGGATC CATCCGCGCC ACAGGTTCCG
ATCATCCGCC ATGCCGACGT GCGACGCATG CTGCTGGCCC AGAAGACCTA CGTCGAAGGC
GCCTTCGACC TGGGCCTGTA CGCCGCGCGC CTGTTCGACG ACAGCCAGAC CCTGGAGGAC
GACGAACAGC GCCGCCAGGC CCACGAACTG CTCGACCTGT TGACGCCGAT CGTCAAGTCC
TGGCCCTCGG AGTTCTGCCT GAAAGCCAAC GAGCTGGCGA TCCAGATCCT CGGCGGCCAC
GGCTACACCC GCGAATACCC GGTGGAACAG TACTACCGCG ACAACCGCCT GAACCCGATC
CACGAAGGCA CCCACGGCAT CCAGTCGCTC GACCTGCTGG GGCGGAAGGT CGGGCAGAAC
AACGGCGCCG GCCTGCGCCA GCTGACGCGC CTGATCCAGG ACGCCTGCCG GCGCGCCGAA
GCCCATCCGT CCCTGGCCGC CCTGCGCCAG CCGCTGGAAC GGCTGGTGGC GCGGCTGTCC
GAGGTGACCC TGGCGCTGCT CGGCGACCTG ATGCAGGGCC AGGTCAACCA GGGCCTGGCC
AACTCGGCGC TGTACCTGAA GGTGTTCGGC CATGCGGTGA TCGGCTGGCG CTGGCTGGAG
CAGGCGATCC GCGCCGAGGA AGGGCTGGCC CGCGGCGACT CCGCCGACAC CGGTTTCTAC
CGCGGCAAAT TGCAGGCCGC GCGCTACTTC CTGACCTGGG AAGTGCCCGG CTGCCACCAC
GAACTGGCGC TGCTGGAAGC CCGCGACGAT GTCTGTTCGA GCATGCAGGA AGACTGGTTC
TGA
|
|---|
| Protein sequence | MSETLLSSRN LAFELYEVLD AEALTQRPRF AEHSRETFDA ALGTARSLAE KLFAPHNRKG
DEHEPLYENG SATLIPEVKP AVDAFLDAGF LNATRSFEQG GMQLPTLLSQ ACFAHFQAAN
VGSSAYPFLT MGAANLIESF GSEEQKQRFL QPMIEGRFFG TMALTEPHAG SSLSDIRTRA
EAAADGSYRI RGNKIFISGG DHPLSENIVH MVLAKLPDAP PGVKGISLFI VPKFLVNADG
SLGPRNDVIL AGLFHKMGYR GTTSTALNFG DNGACVGYLV GKPHQGLAYM FQMMNEARIG
VGMGAVMLGY AGYLYSLEYA RERPQGRLPD GKDPSAPQVP IIRHADVRRM LLAQKTYVEG
AFDLGLYAAR LFDDSQTLED DEQRRQAHEL LDLLTPIVKS WPSEFCLKAN ELAIQILGGH
GYTREYPVEQ YYRDNRLNPI HEGTHGIQSL DLLGRKVGQN NGAGLRQLTR LIQDACRRAE
AHPSLAALRQ PLERLVARLS EVTLALLGDL MQGQVNQGLA NSALYLKVFG HAVIGWRWLE
QAIRAEEGLA RGDSADTGFY RGKLQAARYF LTWEVPGCHH ELALLEARDD VCSSMQEDWF
|
|---|
| |