Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2164 |
Symbol | |
ID | 5695010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2622866 |
End bp | 2624683 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641264768 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001530045 |
Protein GI | 158522175 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000583422 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACAGG GAACACTTTC AGGCCGCAGG GATGTGGATT TTGTCCTGCA TGAAATGCTT AATGTGGAAG AACTTTCCAA ACACGAACTG TTTGCCGACT TCAACCGGAA AACCATTGAT ATGGTGGTTT CCGAGGCCCG GAATTTCGCA CTCAAAGAGA TCCTTCCCGC CAACGAGGAA GGGGACAAGG GGTGCGTGTT TGAAAACGGC CAGGTCAAGA CACCCGAATC TTTCAAGCGG ATTTTTGATC TGTATTGCGA AGGCGAATGG ATCGGGGCAT CGGAAGATCC CGAGTTCGGC GGCCAGGGCA TGCCCAACGT GCTCAACCTG GCGGCGGCCG AGTTCTTCTC AGGCGCCAGC ATGGCCTTCA TGATGTATCC CGGCCTGACC CACGGGGCCG CCAAGATGAT TGAGTCCCTG GGCACCGAGG AGCAGAAAAA GATCTATGTC AAAAACATGT ATACCGGCAA GTGGGCCGGC ACCATGCTGC TCACCGAGCC CGATGCCGGC ACCGACGTGG GTGCGCTGAC CACCACCGCG AAAAAGAACG ACGACGGCAC CTACTCCATC ACCGGTAACA AGATTTTCAT CTCCGCGGGC GAGCATGACA TGACGGAAAA CATTATTCAT CCGGTGCTGG CCCGTATTGA GGGTGCACCC GCCGGTACCC GCGGCATCTC CCTGTTTATC GTTCCCAAAT ACCGGGTCAA TCCGGACGGC AGCCTGGGCG AGTTCAACGA CGTGGTATGC ACCGGCATTG AAGAGAAGAT GGGCATCCAC GGAAACGCCA CCTGCTCGCT GACCCTGGGC GGCAAGGGCA ACTGCATCGG TACCCTGCTG GGCCAGGAGA ACAAGGGCAT GAAGGCCATG TTCCTGATGA TGAACGAGGC CCGCTTCGGT GTTGGTGTTC AGGGTTTCTC CCTGGGGGCC ACCTCTTTTG CCAACGCGGT TGCCTATGCC AAGGAGCGGA TTCAGGGCCG CGAACTTCTC AAGTTCATGG ACGCCGATGC GCCGTCGGTC AACATCATCA AGCACCCGGA TGTACGCCGG CAACTGCTGG TCATGAAATC CTATGTTGAA GGCATGCGGG CTCTGCTTTA TTACGTTGCC CGGTGTTTCG ACATGGAGCG CGTGCTGGAA GAGTCGGATG AAAAGGAAAA GTACAAGGCC CTGATCGAGT TCCTGATTCC GGTGGTCAAG GCATACTGCA CGGACAAGGG GTTTGAAGTG TGTGTGCTCG GCATGCAGGT ATACGGCGGT TACGGCTATA TTGCGGAGTA TCCCCAGGAG CAGCTGGTGC GCGACTGCAA GATCACCAGC ATCTACGAGG GTACCAACGG GGTCCAGGCC ATGGACCTGC TGGCCCGCAA GCTCGGCATG AAGGGCGGCA AGCCCCTCAT GGATCTGATG GGTGAGATGG GCAACACCGT GGCCCAGGCA AAGGCCGTGG ATGGCTTAAA AGAGCTGGCC GAGTCGGTTG AAAAGGCTTC GGCCAAGCTG GGTGAGGTGG CCATGGCCAT CGGCCAGACC GCCATGTCGG AAAAGGTGCT GGATGCTTTT GGTTCAGCCA CCCCCTTCCT GGAGGTCACC GGCGATGTGG TGATGGCCTG GCTGCACCTG TGGCGGGCCA CCGTGGCGGC CAAGGCTCTG GCAAGCGGCA ACGCCAAGAA AAAGGACGAG GCCTTCTACC AGGGCCAGGT CAAGACCGCC CAGTTCTTTA TTCAGACCCT GCTGCCCATG GCCATGGGCA AGATGGACGG TGTCAAGACC TTTACTTCGG CTGTCATGGA GATTCCTGAA GACGGGTTCA TGCAGTAG
|
Protein sequence | MAQGTLSGRR DVDFVLHEML NVEELSKHEL FADFNRKTID MVVSEARNFA LKEILPANEE GDKGCVFENG QVKTPESFKR IFDLYCEGEW IGASEDPEFG GQGMPNVLNL AAAEFFSGAS MAFMMYPGLT HGAAKMIESL GTEEQKKIYV KNMYTGKWAG TMLLTEPDAG TDVGALTTTA KKNDDGTYSI TGNKIFISAG EHDMTENIIH PVLARIEGAP AGTRGISLFI VPKYRVNPDG SLGEFNDVVC TGIEEKMGIH GNATCSLTLG GKGNCIGTLL GQENKGMKAM FLMMNEARFG VGVQGFSLGA TSFANAVAYA KERIQGRELL KFMDADAPSV NIIKHPDVRR QLLVMKSYVE GMRALLYYVA RCFDMERVLE ESDEKEKYKA LIEFLIPVVK AYCTDKGFEV CVLGMQVYGG YGYIAEYPQE QLVRDCKITS IYEGTNGVQA MDLLARKLGM KGGKPLMDLM GEMGNTVAQA KAVDGLKELA ESVEKASAKL GEVAMAIGQT AMSEKVLDAF GSATPFLEVT GDVVMAWLHL WRATVAAKAL ASGNAKKKDE AFYQGQVKTA QFFIQTLLPM AMGKMDGVKT FTSAVMEIPE DGFMQ
|
| |