| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5032 |
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| Symbol | |
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| ID | 6277943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1183621 |
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| End bp | 1185426 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616123 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001888766 |
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| Protein GI | 187919735 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.690717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATG CGCAGATCAT CAACTCACGT GATCTCGAGT TTCAGTTGTT CGAAGTACTC
GAAGTAGAGA CGCTCACACG CCGCGCGCGT CACGCCGATC ACAGCCGCGA GACCTTCGAC
GCTGCGCTCG ACACCGCGCA TACAGTCGCC GTGGAAAAGT TCGCGACACA CAACCGTCTC
GCGGACGAAC ACGAGCCGCA GTTCGACGGA CAACGCGTCA CCCTGCCCGC CGAAGTGAAA
GACGCGCTCG ACGCCATGCG CGCCAGCGGC TTCCTCGCCG CGGGCAAGGA TTACGAATGG
GGCGGCATGC AGTTGCCGTC GGTGATTTCG TTTGCGTGCC TGTCGCTCTT CAAGAGCGCG
AACATCGCGA CCGCGTCGTA TGCCATGCTG ACCACGGCGA ACGCGAACGT GATCGAGCGC
TTCGGCAGCG AAACGCAAAA GCGCAAGTAT CTGCAAGCGC TCTTCGAAGG GCGCGCGTTC
GGCACCATGG CGTTGACGGA GCCGCAAGCG GGTTCGAGCC TGTCCGATCT CGTCACGAGC
GCCACGCCCA ATGCGGACGG CACTTATTCG ATTCGCGGCA ACAAGATTTT CATTTCAGGC
GGCGACCACG AGTTGAGCGA GAACATCGTG CATCTGGTGC TGGCGCGCAT TCCCGGCGGG
CCGCCGGGCG TCAAGGGCAT ATCGCTCTTC ACCGTGCCGA AGTTCCATGT CAACGAAGAC
GGCAGCCTCG GCGCGCGCAA CGACGTCGCC CTTGCGGGAC TGATTCACAA GATGGGCTGG
CGCGGCACGA CGTCGACCAT GCTGTCGTTC GGCGAACATG GCGAATGCAT CGGCGAGCTG
GTGGGCGAGC CGCATCACGG TCTCGCGTAT ATGTTCCATA TGATGAACGA GGCGCGCATC
GGCGTAGGTC TCGGCGCGGT CATGCTGGGC TACCGCGGCT ATCTCGCGTC GCTTGATTAC
GCGCGCGAAC GGCCGCAAGG GCGCCGCCCC GACAACAAGA ATCCGCTCGA CCCGCAATTG
CCGCTGATCG AACATGCCGA CGTGCGCCGC ATGCTGCTCG CACAAAAAGC CTACGTGGAA
GGCGCTTATG CGTTGTGCCT GTACGCGGCG CGTCTCGTCG ACGAACAGAA CACCGGCGAG
AGCGAAACCG TGCGCGCCGA AGCGGGCCTG CTGCTCGATC TGCTCACGCC GGTGGTGAAA
TCCTGGCCGT CCCAATGGTG TCTCGAAGCA AACAGTCTCG CGATCCAGAT TCACGGCGGC
TACGGCTACA CGCGTGAATA TCCAGTCGAG CAGTTCTATC GCGACAATCG GCTCAACATG
ATTCACGAAG GCACGCACGG CATTCAGGCC ATCGATCTGC TCGGCCGCAA GGTGACGATG
AAACAGGGCG CGGCGCTCAA ACAACTGGCC CGCGAAATCC AGCAGACAAT CGGTACAGCG
CGCGAGCACC CGGCACTGCA CGCACATGCC GATGCGCTCG GCGCAGCATG GACCGATCTG
ACTGCCACTG TCGAGGCGCT GCTGCCCACG CTGACCCATG AAAGCGAACG CGCGCTCGCC
AACGCGAATG CGTTTCTCGA AGCCTTCGGT CATATCGTGA TTGCGTGGAC ATGGCTGCGT
CAGGCGATCG TGGCAAACGC CGCGTTGTCT GCTTCGCATA GCGAAGCAGA CGCGGACTTC
TATCGTGGCA AGCTGCATGC GTGTCAGTGG TTCTTCCGCT GGGAACTGCC GCGCGTCGCG
TTGATGCTCG CCACGTTGCG CACCCTGGAC GACACCACGC TCGCCATGGC GCCGCAATGG
TTCTAG
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| Protein sequence | MQDAQIINSR DLEFQLFEVL EVETLTRRAR HADHSRETFD AALDTAHTVA VEKFATHNRL
ADEHEPQFDG QRVTLPAEVK DALDAMRASG FLAAGKDYEW GGMQLPSVIS FACLSLFKSA
NIATASYAML TTANANVIER FGSETQKRKY LQALFEGRAF GTMALTEPQA GSSLSDLVTS
ATPNADGTYS IRGNKIFISG GDHELSENIV HLVLARIPGG PPGVKGISLF TVPKFHVNED
GSLGARNDVA LAGLIHKMGW RGTTSTMLSF GEHGECIGEL VGEPHHGLAY MFHMMNEARI
GVGLGAVMLG YRGYLASLDY ARERPQGRRP DNKNPLDPQL PLIEHADVRR MLLAQKAYVE
GAYALCLYAA RLVDEQNTGE SETVRAEAGL LLDLLTPVVK SWPSQWCLEA NSLAIQIHGG
YGYTREYPVE QFYRDNRLNM IHEGTHGIQA IDLLGRKVTM KQGAALKQLA REIQQTIGTA
REHPALHAHA DALGAAWTDL TATVEALLPT LTHESERALA NANAFLEAFG HIVIAWTWLR
QAIVANAALS ASHSEADADF YRGKLHACQW FFRWELPRVA LMLATLRTLD DTTLAMAPQW
F
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