| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1258 |
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| Symbol | |
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| ID | 6177474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1391653 |
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| End bp | 1393482 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681016 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001807965 |
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| Protein GI | 172060313 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.594087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC TGATGTCGCG ACGCGATCTC GCGTTCCTGC TGTACGACTG GCTCGATGCC
GACGCGCTCG GCGCGCTGCC GCGCTATGCG GAGCACAGCC GCGAGACCTT CGATGCGGTG
CTCGATACCA GCGAGCGGAT CGCGGCCGAC CTGTTCGCGT CGCATGCGGC GCGCGGCGAC
CGCGAGGAGC CGCGGTTCGA CGGCGAGCGC GTGACGCTGA TCCCCGAAGT CGAGCCGGCC
GTGCGGGCCT TCGCGGCGGC CGGCCTGATC GCCGCCGGCC AGGACGAAGC GTTCGGCGGG
ATGCGGTTGC CGAAGCTCGT CGAAGCCGCA TCGTTCCTGT TCTTCCAGGC CGCGAACATC
GCGACCGCCG CGTATCCGTT CCTCACCGTC GCGAACGCCA ACCTGCTGCT CGCGCACGGC
AGCCCCGCGC AGATCGACGC GTTCGCGCGT CCCGAGCTGG AAGGGCGCTT CTTCGGCACG
ATGTGCCTGT CGGAGCCGCA GGCCGGCTCG TCGCTGTCCG ACATCGTCAC GCGCGCCGAT
TTCGAGTGCG CGTCGCCGCT CGGCCCGCGC TACCGGATCA CCGGCAACAA GATGTGGATT
TCCGGCGGCG ATCACGAACT GGCGGAGAAC ATCGTCCATC TCGTGCTCGC GAAGATTCCC
GACGAACAGG GCCGGCTTCC GCCCGGCACG CGCGGCATCT CGCTGTTCAT CGTCCCCAAG
TACCTGCCGG CCGACGACGG CGCCGCGCGC GGCGAGCGCA ACGACGTGGT GCTGGCCGGC
CTGAATCACA AGATGGGCTA TCGCGGCACG ACCAACTGCC TGCTGAACTT CGGCGAAGGC
ACGCGTCATC GTCCGCAGGG TCGCGCCGGC GCGATCGGCT ATCTGGTCGG CGAACCGAAT
CACGGCCTCG CGTACATGTT CCACATGATG AACGAGGCGC GCATCGGCGT CGGCGCGGGC
GCGGTGGCGC TCGGCTACAC CGGTTACCTG CACGCGCTGG ACTACGCGCG CAACCGGCCG
CAGGGGCGTG CGCTCGGACC GGCCGGCAAG GACGCGGCCG CGCCGCAGGC GCCGATCGTC
GCGCATCCGG ACGTGCGACG CATGCTGCTC GCGCAGAAGG CGTACGTCGA AGGCGGGCTC
GCGCTGATCC TGTACTGCGC GCGGCTCGTC GACGAAGCGC GCGCGCACGG CGATGCGGCA
GTGCGCGCCG AGGCCGCGCA GCTGCTGGAC ATCCTGACGC CGATCGCGAA AAGCTGGCCG
TCGCAGTGGT GCCTCGCGGC CAACGATCTC GCGATCCAGG TGCATGGCGG CTATGGCTAT
ACGCGCGACT ATCCCGTCGA GCGACTGTAT CGCGACAACC GCCTGAACCC GATCCACGAA
GGCACGCATG GCATCCAGGC GCTCGACCTG CTGGGCCGCA AGGTCGGCCA GGACGACGGT
GCGCTGCTGC GCACGCTCGA TGCGCGAATC GGCGCGACGG TCCAACGCGC ACGGGCCGCG
GACGGCGACG CGCGCTCGCA TGCCGATGCG CTCGCGCAGC GCTGGGCGCG GCTCGTCGAG
CTCACGCGCG CGCTGGCCGC GCTTGACGAT CCGCAGGTGC GGCTCGCGAA TGCCAGCGTC
TACCTGGAGG CGTTCGGCCA TCTGGTCGTC GCGTGGCTGT GGCTCGACGT GACGCTTGCC
GCGCACGGGC ACGACGGCGA TTTCCACGAC GGCAAGCGCG CCGCCGCGCG TTACTTCTTT
CGCTGGGAAC TGCCGAAGGT GGATGCGCAG CTCGATCTGC TGGCGAGCGT CGATACGACG
ACGCTCGAGA TGCGCGACGC GTGGTTCTGA
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| Protein sequence | MSLLMSRRDL AFLLYDWLDA DALGALPRYA EHSRETFDAV LDTSERIAAD LFASHAARGD
REEPRFDGER VTLIPEVEPA VRAFAAAGLI AAGQDEAFGG MRLPKLVEAA SFLFFQAANI
ATAAYPFLTV ANANLLLAHG SPAQIDAFAR PELEGRFFGT MCLSEPQAGS SLSDIVTRAD
FECASPLGPR YRITGNKMWI SGGDHELAEN IVHLVLAKIP DEQGRLPPGT RGISLFIVPK
YLPADDGAAR GERNDVVLAG LNHKMGYRGT TNCLLNFGEG TRHRPQGRAG AIGYLVGEPN
HGLAYMFHMM NEARIGVGAG AVALGYTGYL HALDYARNRP QGRALGPAGK DAAAPQAPIV
AHPDVRRMLL AQKAYVEGGL ALILYCARLV DEARAHGDAA VRAEAAQLLD ILTPIAKSWP
SQWCLAANDL AIQVHGGYGY TRDYPVERLY RDNRLNPIHE GTHGIQALDL LGRKVGQDDG
ALLRTLDARI GATVQRARAA DGDARSHADA LAQRWARLVE LTRALAALDD PQVRLANASV
YLEAFGHLVV AWLWLDVTLA AHGHDGDFHD GKRAAARYFF RWELPKVDAQ LDLLASVDTT
TLEMRDAWF
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