| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1762 |
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| Symbol | |
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| ID | 1220600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1888483 |
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| End bp | 1890360 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238154 |
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| Product | acyl-CoA dehydrogenase oxidoreductase protein |
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| Protein accession | NP_519883 |
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| Protein GI | 17546481 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.492096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.209412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTC TGCTGCTGTC GCGCCGCGAC CTGAGCTTTG TGCTCTACGA ATGGCTCGAC
GTGGAGGCGC TTACGCGCTT TCCGCGTTAT GCCGACCACT CCCGCGAAAC CTTCGATGCG
GCGCTCGATA CCTGCGAGCG CATCGCCACC GACCTGTTCG CGCCGCACAA CAAGAAGAAC
GACCAGCAGG AGCCGCATTT CGACGGCACC GCGGTCCACA TCATTCCCGA GGTGAAGACG
GCGCTGGACG CCTTCAACAA GGCGGGCCTG ATGGCCGCGG GGCAGGATTT CGAGCGCGGC
GGCATGCAAC TGCCCACCGT GGTCGAGAAG GCCGGCTTCG GTTTCTTCAA GGCGGCCAAT
GTCGGCACCA GTTCCTATCC GTTCCTGACC ATCGGCAATG CCAACCTGCT GCTGGCGCAC
GGCACGCCCG CGCAGATCGA GACGTTCGTG CAGCCCGAGC TGGAGGGGCG CTTCTACGGC
ACGATGTGCC TGTCGGAGCC GCAGGCGGGG TCGTCGCTGT CGGACATCGC CACGCGCGCC
GAATACGAGG GCGAATCGCC GCTGGGGCCG CAGTACCGGC TGACCGGCAA CAAGATGTGG
ATCTCGGCCG GCGAGCACGC GCTGTCGGAC AACATCGTGC ATCTGGTGCT GGCCAAGATT
CCCGGCCCGG ACGGCAAGCC GATCCCCGGC GTGAAGGGCA TCTCGCTGTT CATCGTGCCC
AAGTTCCTTG TCGGCGCGGA CGGGGCGCTG GGCGAGCGCA ACGACGTGGC GCTCGCCGGG
CTGAACCACA AGATGGGCTA CCGCGGCACC ACCAACTGCC TGCTCAACTT CGGCGAAGGC
ACGCAGTTCC GCCCCAAGGG GCCGGACGGC CAGCCGCGCG CCGGCGCCAT CGGCTACCTG
GTCGGCGAGC CGCACCAGGG GCTGGCGTGC ATGTTCCACA TGATGAACGA GGCGCGCATC
GGTGTCGGCA TGGGGGCGAC CATGCTGGGC TACACCGGCT ACCTGCACGC GCTGGACTAC
GCGCGCAATC GCCCGCAGGG CCGGCCGATC GGCCCGGCCG GCAAGGATGC CGCGTCGCCG
CAGGTCCGTA TCGTCGACCA CGCCGACGTG CGCCGCATGC TGCTGGCGCA GAAGGCCTAC
GTGGAAGGCG CGCTCGGTCT GAACCTGTAT TGCGCCAAGC TGGTCGACGA GGAGCGCGGC
GCGGAAAGCG AGGGCGACGC CGACGCGCGC GCCACGCTCG GCCTGCTGCT CGACATCCTC
ACGCCGATCG CCAAGAGCTG GCCGTCGCAG TGGTGCCTGG AGGCCAACAG CCTGGCGATC
CAGGTGCATG GCGGCTACGG CTACACGCGC GAGTACAACG TCGAGCAGTT CTATCGCGAC
AACCGCCTGA ACCCGATCCA CGAAGGCACG CACGGCATCC AGGGGCTGGA CCTGCTCGGT
CGCAAGGTGG TGATGCAGGA CGGCGCCGCC TTCGCCGCGC TGGGCCGGCG CGTGCAGGCC
ACCGTGGCCC GCGCGCTGGA CAGCGGCGAT GCGGCGCTGG CCGGCTGGGG CCGCGCGCTC
GGCATGGCTG CCCAGAGCCT GGCCAAGGTG ACGCAGCAGT TGTGGGCGGC GGGCGATCCG
CGCGTGACGC TGGCCAATGC CTCGGTCTAC CTGGAGGCGT TCGGCCACGT CGTCATCGCG
TGGATCTGGC TGGAGCAGGC GCTCGCCGCC GCGCGGGCCC TGCCTGGCGC CCAGGGCGAC
GATGCCGGCT TCTATCGCGG CAAGCTGCAG GCCGCGCGCT ATTTCTTCCA GTGGGAGCTG
CCGAAGACCG GTCCGCAGCT GGCGCTGCTG GCCTCGCTCG ACACCACCAC GCTGGACATG
CAGGACGCCT GGTTCTGA
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| Protein sequence | MSSLLLSRRD LSFVLYEWLD VEALTRFPRY ADHSRETFDA ALDTCERIAT DLFAPHNKKN
DQQEPHFDGT AVHIIPEVKT ALDAFNKAGL MAAGQDFERG GMQLPTVVEK AGFGFFKAAN
VGTSSYPFLT IGNANLLLAH GTPAQIETFV QPELEGRFYG TMCLSEPQAG SSLSDIATRA
EYEGESPLGP QYRLTGNKMW ISAGEHALSD NIVHLVLAKI PGPDGKPIPG VKGISLFIVP
KFLVGADGAL GERNDVALAG LNHKMGYRGT TNCLLNFGEG TQFRPKGPDG QPRAGAIGYL
VGEPHQGLAC MFHMMNEARI GVGMGATMLG YTGYLHALDY ARNRPQGRPI GPAGKDAASP
QVRIVDHADV RRMLLAQKAY VEGALGLNLY CAKLVDEERG AESEGDADAR ATLGLLLDIL
TPIAKSWPSQ WCLEANSLAI QVHGGYGYTR EYNVEQFYRD NRLNPIHEGT HGIQGLDLLG
RKVVMQDGAA FAALGRRVQA TVARALDSGD AALAGWGRAL GMAAQSLAKV TQQLWAAGDP
RVTLANASVY LEAFGHVVIA WIWLEQALAA ARALPGAQGD DAGFYRGKLQ AARYFFQWEL
PKTGPQLALL ASLDTTTLDM QDAWF
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