Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1582 |
Symbol | |
ID | 9245432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 1934730 |
End bp | 1936526 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003679517 |
Protein GI | 297560543 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.900007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00956274 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCGTCCA CCCTGCTGTC CACGCGCGAC CTGCACTTCC TGCTCTACGA GTGGCTCGAC ACCGAGGCGC TCACCAGACG CCCCCACTAC GCCGACCACT CGCGCGAGAC CCTCGACGCC GCGCTGGAGC TGGCCGAACG CGTGGCCACC GACCACTTCG CGCCGCACAA CAAAACCAAC GACGCCAACG AGCCCCGCTT CGACGGCGAG CGCGTCCACG TCATCCCCGA GGTGGGGAGG GCTCTGGAGG TCTACGCCGC GACCGGCCTG AGCGCCGCCG GGATGCCCGC CTCCGTGGGC GGCGCCCAGG TCCCGCACGT GGTCTCCAGC GCGTGCGGCG CCTACTTCCA GGCCGCCAAC CTGGGCACCT CGGCCTACCC CTTCCTCACC TCGGGCAACG CGCGCCTGCT CCTGGCGCAC GGCACCCCCG AGCAGGTCGA CACCTGGGTG CGCCCCATGG TGGAGGGACG CTTCACCGGG ACCATGTGCC TGTCCGAGCC GCAGGCGGGC AGCTCTCTGG CCGACATCAC CACCCGCGCC GAGGAGGACG GGGAGGGCGG CTACCGGCTG TTCGGCAACA AGATGTGGAT CTCTGCGGGC GACCACGAAC TGACCGAGAA CATCGTGCAC CTGGTGCTGG CCAAGATCCC CGGCGGTCCG CCCGGGGTCC GGGGCATCTC CCTGTTCGTC GTGCCCAAGT ACCTGCTGGA AGCCGACGGG ACGATCGGCG AGCGCAACGA CGTCGTGCCC GCCGGGCTCA ACCACAAGAT GGGCTACCGG GGCACCGTCA ACGCGATGCT CAACTTCGGC GAGGGCCGCC ACGCCCCCGG CGGGCGGCCG GGCGCGGTGG GCTACCTGGT CGGCGAGCCC CACCAGGGGC TGAAGTACAT GTTCCACATG ATGAACGGGG CCCGGATCGG GGTGGGCGCG GGCGCCGCCG CCGTCGGCTA CACCGGCTAC CTCAAGTCGC TGGCCTACGC CCGCGAACGC CTCCAGGGCC GCCCGCTGGG CGACAAGGAC CCCGGGCAGC CGCAGGTCCC CATCGTCGAG CACACCGACG TGCGCCGGAT GCTGCTCGCC CAGAAGAGCT ACGTCGAGGG CGCGCTCGCC CTGGTGCTGT ACTGCGCCCG GCTGGTGGAC GAGACCGCGA GTGCCGAGGA CGACAAGGCG CGCGAGCGGG CCCACCTGCT GCTGGACGTG CTCACGCCGA TCGCCAAGAG CTGGCCCTCC CAGTGGTGCG TGGAGGCCAA CAGCCTGGCC ATCCAGGTGC ACGGCGGGTA CGGGTACACG CGCGAGTACG ACGTGGAGCA GCACTACCGG GACAACCGGC TCAACCCGAT CCACGAGGGG ACCCACGGCG TCCAGGCCCT GGACCTGCTG GGCCGCAAGG CCGTGCTCGA CGGCGGCTCC CGACTGTCGC TGCTGGTGGA GACCGCGCGC GCCACCGCGG ACCGGGCCCG GGAGCTGGGC GGGCGCGAGG CCGAGTACGC GGTGCTGCTG TCGGAGGCCC TGGACCGGAC CGCGGAGACG GCCGCCGCGG CCTGGGCCGA GGGAGACCCG GCGGTGGCGC TGGCCAACGC CACCCCCTAC CTGGAGGCGG TGGGACACGT GGTGGTCGCC TGGATGTGGC TGGAGCAGCT GGTGGCCGCG CACGGGCGCG AGGGCGGCTT CTACGAGGGC AAGCGCGCCG CGGCGGCGTA CTTCTTCCGG CACGAGCTGC CGCGCACCGG GCCGCAGTTC GACCTGGTGG CCTCGCGCGA CCGGACGGTG CTGGACGTCT CGCCCGACGT CCTCTGA
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Protein sequence | MASTLLSTRD LHFLLYEWLD TEALTRRPHY ADHSRETLDA ALELAERVAT DHFAPHNKTN DANEPRFDGE RVHVIPEVGR ALEVYAATGL SAAGMPASVG GAQVPHVVSS ACGAYFQAAN LGTSAYPFLT SGNARLLLAH GTPEQVDTWV RPMVEGRFTG TMCLSEPQAG SSLADITTRA EEDGEGGYRL FGNKMWISAG DHELTENIVH LVLAKIPGGP PGVRGISLFV VPKYLLEADG TIGERNDVVP AGLNHKMGYR GTVNAMLNFG EGRHAPGGRP GAVGYLVGEP HQGLKYMFHM MNGARIGVGA GAAAVGYTGY LKSLAYARER LQGRPLGDKD PGQPQVPIVE HTDVRRMLLA QKSYVEGALA LVLYCARLVD ETASAEDDKA RERAHLLLDV LTPIAKSWPS QWCVEANSLA IQVHGGYGYT REYDVEQHYR DNRLNPIHEG THGVQALDLL GRKAVLDGGS RLSLLVETAR ATADRARELG GREAEYAVLL SEALDRTAET AAAAWAEGDP AVALANATPY LEAVGHVVVA WMWLEQLVAA HGREGGFYEG KRAAAAYFFR HELPRTGPQF DLVASRDRTV LDVSPDVL
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