Gene Ndas_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1582 
Symbol 
ID9245432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1934730 
End bp1936526 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content73% 
IMG OID 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003679517 
Protein GI297560543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.900007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00956274 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCGTCCA CCCTGCTGTC CACGCGCGAC CTGCACTTCC TGCTCTACGA GTGGCTCGAC 
ACCGAGGCGC TCACCAGACG CCCCCACTAC GCCGACCACT CGCGCGAGAC CCTCGACGCC
GCGCTGGAGC TGGCCGAACG CGTGGCCACC GACCACTTCG CGCCGCACAA CAAAACCAAC
GACGCCAACG AGCCCCGCTT CGACGGCGAG CGCGTCCACG TCATCCCCGA GGTGGGGAGG
GCTCTGGAGG TCTACGCCGC GACCGGCCTG AGCGCCGCCG GGATGCCCGC CTCCGTGGGC
GGCGCCCAGG TCCCGCACGT GGTCTCCAGC GCGTGCGGCG CCTACTTCCA GGCCGCCAAC
CTGGGCACCT CGGCCTACCC CTTCCTCACC TCGGGCAACG CGCGCCTGCT CCTGGCGCAC
GGCACCCCCG AGCAGGTCGA CACCTGGGTG CGCCCCATGG TGGAGGGACG CTTCACCGGG
ACCATGTGCC TGTCCGAGCC GCAGGCGGGC AGCTCTCTGG CCGACATCAC CACCCGCGCC
GAGGAGGACG GGGAGGGCGG CTACCGGCTG TTCGGCAACA AGATGTGGAT CTCTGCGGGC
GACCACGAAC TGACCGAGAA CATCGTGCAC CTGGTGCTGG CCAAGATCCC CGGCGGTCCG
CCCGGGGTCC GGGGCATCTC CCTGTTCGTC GTGCCCAAGT ACCTGCTGGA AGCCGACGGG
ACGATCGGCG AGCGCAACGA CGTCGTGCCC GCCGGGCTCA ACCACAAGAT GGGCTACCGG
GGCACCGTCA ACGCGATGCT CAACTTCGGC GAGGGCCGCC ACGCCCCCGG CGGGCGGCCG
GGCGCGGTGG GCTACCTGGT CGGCGAGCCC CACCAGGGGC TGAAGTACAT GTTCCACATG
ATGAACGGGG CCCGGATCGG GGTGGGCGCG GGCGCCGCCG CCGTCGGCTA CACCGGCTAC
CTCAAGTCGC TGGCCTACGC CCGCGAACGC CTCCAGGGCC GCCCGCTGGG CGACAAGGAC
CCCGGGCAGC CGCAGGTCCC CATCGTCGAG CACACCGACG TGCGCCGGAT GCTGCTCGCC
CAGAAGAGCT ACGTCGAGGG CGCGCTCGCC CTGGTGCTGT ACTGCGCCCG GCTGGTGGAC
GAGACCGCGA GTGCCGAGGA CGACAAGGCG CGCGAGCGGG CCCACCTGCT GCTGGACGTG
CTCACGCCGA TCGCCAAGAG CTGGCCCTCC CAGTGGTGCG TGGAGGCCAA CAGCCTGGCC
ATCCAGGTGC ACGGCGGGTA CGGGTACACG CGCGAGTACG ACGTGGAGCA GCACTACCGG
GACAACCGGC TCAACCCGAT CCACGAGGGG ACCCACGGCG TCCAGGCCCT GGACCTGCTG
GGCCGCAAGG CCGTGCTCGA CGGCGGCTCC CGACTGTCGC TGCTGGTGGA GACCGCGCGC
GCCACCGCGG ACCGGGCCCG GGAGCTGGGC GGGCGCGAGG CCGAGTACGC GGTGCTGCTG
TCGGAGGCCC TGGACCGGAC CGCGGAGACG GCCGCCGCGG CCTGGGCCGA GGGAGACCCG
GCGGTGGCGC TGGCCAACGC CACCCCCTAC CTGGAGGCGG TGGGACACGT GGTGGTCGCC
TGGATGTGGC TGGAGCAGCT GGTGGCCGCG CACGGGCGCG AGGGCGGCTT CTACGAGGGC
AAGCGCGCCG CGGCGGCGTA CTTCTTCCGG CACGAGCTGC CGCGCACCGG GCCGCAGTTC
GACCTGGTGG CCTCGCGCGA CCGGACGGTG CTGGACGTCT CGCCCGACGT CCTCTGA
 
Protein sequence
MASTLLSTRD LHFLLYEWLD TEALTRRPHY ADHSRETLDA ALELAERVAT DHFAPHNKTN 
DANEPRFDGE RVHVIPEVGR ALEVYAATGL SAAGMPASVG GAQVPHVVSS ACGAYFQAAN
LGTSAYPFLT SGNARLLLAH GTPEQVDTWV RPMVEGRFTG TMCLSEPQAG SSLADITTRA
EEDGEGGYRL FGNKMWISAG DHELTENIVH LVLAKIPGGP PGVRGISLFV VPKYLLEADG
TIGERNDVVP AGLNHKMGYR GTVNAMLNFG EGRHAPGGRP GAVGYLVGEP HQGLKYMFHM
MNGARIGVGA GAAAVGYTGY LKSLAYARER LQGRPLGDKD PGQPQVPIVE HTDVRRMLLA
QKSYVEGALA LVLYCARLVD ETASAEDDKA RERAHLLLDV LTPIAKSWPS QWCVEANSLA
IQVHGGYGYT REYDVEQHYR DNRLNPIHEG THGVQALDLL GRKAVLDGGS RLSLLVETAR
ATADRARELG GREAEYAVLL SEALDRTAET AAAAWAEGDP AVALANATPY LEAVGHVVVA
WMWLEQLVAA HGREGGFYEG KRAAAAYFFR HELPRTGPQF DLVASRDRTV LDVSPDVL