| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1485 |
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| Symbol | |
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| ID | 8019130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1564748 |
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| End bp | 1566616 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830263 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002981444 |
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| Protein GI | 241663084 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.275641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0574258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCGA AACTGCTATC CCGCCGCGAC CTCAGCTTCC TGCTCTACGA ATGGCTCAAC
GTCGAATCGC TCACGCGCAT TCCGCGTTAC GCAGACCACT CCCGCGAAAC CTTCGACGCC
GCACTGGACA CGTGCGAGCG CATCGCAACG GACCTGTTTG CTCCGCATAA CAAGAAAAAC
GACCAAGAAG AACCGCATTT CGACGGCAAC AAGGTCCACA TCATTCCGGA GGTGAAGGTC
GCGCTGGATG CCTTCAACAA GGCGGGCCTG ATGGCAGCCG GGCAGGACTT CGAACGCGGC
GGCATGCAGC TGCCGACCGT GGTCGAGAAA GCCGGTTTCG GTTTCTTCAA GGCCGCCAAC
GTCGGCACCA GCTCCTACCC GTTCCTCACC ATCGGCAACG CGAATCTGCT GCTCGCGCAC
GGCACGCCCG CGCAGATCGA AACGTTCGTG CAGCCCGAGA TGGAAGGCCG CTTCTACGGC
ACGATGTGCC TGTCGGAGCC GCAGGCCGGT TCGTCGTTGT CGGACATCGT CACGCGCGCT
GAATACGAAG CCGAATCGCC GCTCGGCGCG CAATACCGTT TGACCGGCAA CAAGATGTGG
ATCTCCGCCG GCGAGCATGA ACTGTCAGAG AACATCGTCC ACCTCGTGCT GGCGAAGATT
CCCGGGCCGG ACGGCAAGCT GATTCCCGGC GTGAAGGGCA TTTCGCTGTT CATCGTGCCG
AAGTTCCTCG TCAACGCCGA TGGCTCGCTC GGCGAGCGCA ATGACGTGGT GCTTGCCGGC
TTGAACCACA AGATGGGCTA TCGCGGCACG ACCAACTGCC TGTTGAACTT TGGCGAAGGC
ACGCAGTTCC GCCCGAAGGG TGCAGACGGC CAGCCGCGCG CTGGGGCGAT CGGTTATCTC
GTCGGGGAGC CGCACAAGGG CCTCGCATGC ATGTTCCACA TGATGAACGA GGCGCGCATC
GGCGTCGGCA TGGGCGCGAC GATGCTCGGC TACACCGGTT ACCTGCATGC GGTGGACTAC
GCGCGCAATC GCCCGCAAGG GCGTCCGGTC GGGCCGTCGG GCAAGGATGC CGCGGCTGCG
CAGGTCCGCA TCGTCGATCA CGCTGACGTG CGTCGCATGC TGCTGGCGCA AAAGGCCTAC
GTGGAAGGCG CGCTCGGCCT GAACCTGTAT TGCGCCAAGC TCGTCGATGA AGAGCGCGGT
GAAACCGACG CGGCCAAACG CGCCAAACTC GGTCTGCTGC TCGACATCCT GACGCCGATT
GCCAAGAGCT GGCCGTCGCA GTGGTGCCTG GAGGCCAACA GCCTGGCGAT CCAGGTGCAC
GGCGGTTACG GCTACACGCG CGAGTACAAC GTCGAACAGT TTTACCGCGA CAACCGCCTG
AACCCGATTC ACGAAGGCAC GCATGGCATC CAGGGCCTGG ACCTGCTGGG TCGCAAGGTC
GTGATGCAGG ACGGCGCTGC CTTCGCCGCG CTGGGTGAGC GTGTGCAGGC CACCGTCGGC
CGCGCGTTGG AAACCGACGA CGAAACGTTG GTCGGCTACG GCCGCGCACT CGGCATGGCG
ACGCAGAAAC TGGCCAAGGT CACGCAGACG CTGTGGGCCG CTGGCGACCC GCGCGTGACG
CTGGCGAATG CCTCCGTCTA TCTGGAAGCG TTCGGCCACG TGGTTGTCGC GTGGATCTGG
CTCGAGCAGG CGCTGGCCGC GGCCAAAGCC CTGCCGAACG CCCAAGGCGA AGACGCCGAT
TTCTACCGCG GCAAGCTGCA GGCCACACGC TATTTCTTCC AGTGGGAACT GCCGAAGATC
GACCCGCAGA TCGTGCTGCT GGGCTCGCTC GACACGACCA CGCTGGACAT GCAGGACGCC
TGGTTCTAA
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| Protein sequence | MSSKLLSRRD LSFLLYEWLN VESLTRIPRY ADHSRETFDA ALDTCERIAT DLFAPHNKKN
DQEEPHFDGN KVHIIPEVKV ALDAFNKAGL MAAGQDFERG GMQLPTVVEK AGFGFFKAAN
VGTSSYPFLT IGNANLLLAH GTPAQIETFV QPEMEGRFYG TMCLSEPQAG SSLSDIVTRA
EYEAESPLGA QYRLTGNKMW ISAGEHELSE NIVHLVLAKI PGPDGKLIPG VKGISLFIVP
KFLVNADGSL GERNDVVLAG LNHKMGYRGT TNCLLNFGEG TQFRPKGADG QPRAGAIGYL
VGEPHKGLAC MFHMMNEARI GVGMGATMLG YTGYLHAVDY ARNRPQGRPV GPSGKDAAAA
QVRIVDHADV RRMLLAQKAY VEGALGLNLY CAKLVDEERG ETDAAKRAKL GLLLDILTPI
AKSWPSQWCL EANSLAIQVH GGYGYTREYN VEQFYRDNRL NPIHEGTHGI QGLDLLGRKV
VMQDGAAFAA LGERVQATVG RALETDDETL VGYGRALGMA TQKLAKVTQT LWAAGDPRVT
LANASVYLEA FGHVVVAWIW LEQALAAAKA LPNAQGEDAD FYRGKLQATR YFFQWELPKI
DPQIVLLGSL DTTTLDMQDA WF
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