| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5020 |
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| Symbol | |
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| ID | 1186705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5709754 |
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| End bp | 5711556 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396341 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | NP_794753 |
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| Protein GI | 28872134 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGT CGCTGCTCAG TTCCCGAAAC CTGGCTTTCG AGCTGTATGA AGTGCTGGAC
GCCGAAGGTC TGACGGGTCG CGAGCGCTTT GCCGAGCACT CGCGGGAAAC CTTTGACGCA
GCCCTGGGGA CAGCGCGCGT CATCGCGGAA AAGTACTTTG CACCGCACAA CCGCAAGGCC
GACGAAAACG AACCGCGCTA TGAACATGGC GAGGCGATTC TGATCCCGGA GGTCAAGCCT
GCGGTGGATG CGTTTATTGC GGCGGGCTTT CTCAACGCAT CGCGTGATTT CCACGCAGGT
GGCATGCAAT TGCCTACCCT GCTGTCGCAA GCCTGCTTTG CCCACTTTCA GGCCGCCAAC
GTCGGGACCA CGTCCTATCC GTTTCTGACC ATGGGCGCCG CCAACCTGAT CGAAAGTTTT
GGCAGTGACG AGCACAAACA ACGTTTTCTG CAACCGATGA TCGAGGGGCG CTTTTTCGGC
ACGATGGCGC TGACCGAGCC CCATGCGGGT TCATCATTGT CAGACATCCG CACACGCGCC
GAACTGGCAG ATGACGGTAC GTATCGGCTG CGTGGCAACA AGATATTCAT TTCCGGGGGC
GATCATTCGC TGTCGGAAAA TATCGTGCAC CTGGTGCTGG CGAAACTGCC GGATGCGCCA
GGTGGCGTCA AAGGCATCTC ACTGTTCATC GTGCCCAAGT TTCTGGTCAA CGACGACGGC
AGCCTAGGCA AGCGCAATGA TGTGCTGCTT GCCGGGCTGT TTCACAAGAT GGGCTGGAAA
GGCACTACCT CTACAGCGCT GAATTTCGGC GATAACGGTG AATGTGTCGG CTATCTGGTT
GGCAAGCCGC ATCACGGTTT GAGTTACATG TTCCAGATGA TGAACGAAGC GCGTATCGGC
GTTGGCCTGG GCGCTGTCAT GTTGGGCTAC TCCGGTTATC TGTATGCGCT GGATTACGCC
CGGGATCGAC CTCAGGGTCG CCTGCCCGAC AGCAAAAGCC CCGAGAGCGC GCCCGTGCCG
ATCATTCAGC ACGCTGACGT GCGGCGCATG TTGCTGACCC AGAAGGCTTA CGTAGAGGGC
GCATTCGACC TGTGCCTGTA TGCCTCACGG CTGTTCGACG ACACCCAGAC CGGGGAAACC
GAAGACGTGC GCAAGCACGC CCATGAGCTG CTGGACTTGC TGACCCCCGT CGTCAAATCC
TGGCCTTCGG AGTTCTGCCT GAAGGCCAAT GAACTGGCGA TTCAGGTGCT CGGCGGTCAT
GGTTACACCC GCGAGTATCC CGTTGAGCAG TACTACCGCG ACAACCGGCT CAATCCGATT
CATGAAGGCA CTCACGGCAT CCAGTCACTG GACCTGCTCG GGCGCAAGCT CGCGCAGAAC
GGTGGCACCG CCCTCAAGCA ACTGCTGCGC CTGATCGCCA ACACCTGCGA GCGCGCGCAG
GCTCACGAGT CACTCGTTAA ACTGCGCCAG CCTCTGGAAC AATTGGTTGC TCGCTTGCAG
GCTGTCACTC TGGGGCTGCT GGGCGATCTG GCGCAAGGCA GGATCACCAG CACACTGGCC
AACTCGGCGC TGTACCTCAA GGCATTCGGT CACACGGTAA TCGGCTGGCG CTGGCTGGAA
CAGGCAATCC GCGCCGAGGA AGGCCTGGGC AAAGGTAATT CGGCGGACAG TGATTTTTAC
CAGGGCAAGT TGAAAGCAGC CCGGTATTTC CTGACGTGGG AAGTACCGGG CTGCCATCAT
GAACTGGCGA TTCTGGAAAA CCGCGATGAC ACCTGTCTGG CAATGCGCGA TGACTGGTTC
TGA
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| Protein sequence | MSESLLSSRN LAFELYEVLD AEGLTGRERF AEHSRETFDA ALGTARVIAE KYFAPHNRKA
DENEPRYEHG EAILIPEVKP AVDAFIAAGF LNASRDFHAG GMQLPTLLSQ ACFAHFQAAN
VGTTSYPFLT MGAANLIESF GSDEHKQRFL QPMIEGRFFG TMALTEPHAG SSLSDIRTRA
ELADDGTYRL RGNKIFISGG DHSLSENIVH LVLAKLPDAP GGVKGISLFI VPKFLVNDDG
SLGKRNDVLL AGLFHKMGWK GTTSTALNFG DNGECVGYLV GKPHHGLSYM FQMMNEARIG
VGLGAVMLGY SGYLYALDYA RDRPQGRLPD SKSPESAPVP IIQHADVRRM LLTQKAYVEG
AFDLCLYASR LFDDTQTGET EDVRKHAHEL LDLLTPVVKS WPSEFCLKAN ELAIQVLGGH
GYTREYPVEQ YYRDNRLNPI HEGTHGIQSL DLLGRKLAQN GGTALKQLLR LIANTCERAQ
AHESLVKLRQ PLEQLVARLQ AVTLGLLGDL AQGRITSTLA NSALYLKAFG HTVIGWRWLE
QAIRAEEGLG KGNSADSDFY QGKLKAARYF LTWEVPGCHH ELAILENRDD TCLAMRDDWF
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