| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2066 |
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| Symbol | |
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| ID | 4278978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2448929 |
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| End bp | 2450734 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134855 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_750750 |
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| Protein GI | 114563237 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCAA CGTTAATGAA TGAACGCGAT CTCGAATTTA TGCTTTACGA ACTGTTTGAC
AGTGAAGCGC TAACGAGCCG AGCACGTTAT CAAGATCACG ATCGCCAGAC CTTTAATGAA
GTTGTCACTA CGGCAAAAGC GATCGCAGAA AAATACTTTC TTCCTATCCG TCAGAAATTG
GATACTCACC AACCGACATT TGATGGTAAA AAAGTGCATA TCATTCCAGA ACTTAAAACC
GCAATCGATG CGGTTAACGA GTCTGGTATT GGTTCTGCTA CTGCAGATTA TGATTTAGGT
GGTATGCAAT TACCGCCGAT TATCGCCAGT GCAGCAGCCT CATTTTTGAG TGTGGCTGGC
GGTGTCGGTA TGGGTTACAA CATGTTAACC ACAGCCAACG CCAACTTGTT GCAAGCACAT
GGCAGTCCAG AACTGATTAA CACTTGGGTT AAGCCCATGC GCGAAGGCCG TTTTATGGGC
ACCATGGCCA TGACCGAACC TGGCAGTGGC TCGGCTTTGG GTGACTTAAT TACCAAGGCA
GTCAAGTCGG ACGACGGTAC TTATCGCATT ACTGGCAATA AAATTTATAT TTCAGGCGGA
GACCATGATT TAAGCGACAA CATCGTTCAT TTGGTGTTAG CACGAATTCA AGGCGCACCA
AAAGGTGTGA AAGGTATTTC GTTATTTGTG GTACCTAAGT TTTTGCTTAA TGAAGATGGT
TCAGTCGGTG AAGACAATGA GGTCGCTCTC GCTGGGCTAT TTCATAAAAT GGGTGGCCGC
GCGCAAACCT CAACTGCTCT GAGTTTTGGT GAAAAAAATG GCTCAATAGG CTATTTGGTC
GGTGAAGAAC ATTGCGGTTT AAAGTACATG TTCCACATGA TGAATGAAGC TCGCATCATG
GTGGGTACCA GTGGTGCGGT ATTGGCTGTG GCTGGTTATC AATATTCAGT CGATTACGCT
AAAAACCGTC CGCAGGGTCG ACTACCCTCG TGTAAAGACC CGCAATCCCC TATGGTCAAC
ATCATTGAGC ATGCTGATGT AAAACGCATG TTATTAGCGC AAAAAGCCTA TGCAGAAGGG
GCAATGGCGT TAGTGTTGTA TGGGACTCAA TTAAGCGATG ACGAACGTAC TGCAGACACC
AGTGAGCAGC GTGAACATGC CCATACTTTA TTAGATTTTT TAACCCCAAT CATTAAAACC
TGGCCATCTG AATATGGCCC TAAAGCTAAC TCTTATGCTA TTCAAGTCAT GGGCGGGCAT
GGTTACATCA ATGAACATCC AGTTGAGATG TTTTATCGTG ATAACCGCCT AAACCCAATA
CATGAAGGCA CCACGGGAAT ACAATCGTTA GATTTGATCA CCCGTAAAGT GCCGATGAAT
AAGATGCAGG GTTATAAAGC CACCTTACAC GAAATAACTA AAACTATTGA ACAAGCCAAA
CAATACGACA GCTTGAGCGA ATATACCCAG AAGCTAAGCG AAGCGGTAGA GACATTAACG
CTGACAACCG AAGCCGTCCT TAACGGCATG GCAACGAAGA ATATCGATTT AGCCTTAGCC
AACTCAGTTA AGTATTTAGA GTTGTTTGGC CATGTCATTA TTGCATGGTT ATGGCTTAAA
CAAAGTATGG TTGCCACCAA AGCCTTAGCA CAGCAACCGC ATCAAGCTGA TGAGTTTTTC
TATAAAGGTA AGTTACAGGC ATCGCAGTAT TTCTATCGCT TTGAATTACC CAAAATTGCG
GTGTGGTCAT CTCTGTTGAG GAGTACTGAC AGTACCAGTT TTGACATGCA AGCCGACTGG
TTTTAG
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| Protein sequence | MPATLMNERD LEFMLYELFD SEALTSRARY QDHDRQTFNE VVTTAKAIAE KYFLPIRQKL
DTHQPTFDGK KVHIIPELKT AIDAVNESGI GSATADYDLG GMQLPPIIAS AAASFLSVAG
GVGMGYNMLT TANANLLQAH GSPELINTWV KPMREGRFMG TMAMTEPGSG SALGDLITKA
VKSDDGTYRI TGNKIYISGG DHDLSDNIVH LVLARIQGAP KGVKGISLFV VPKFLLNEDG
SVGEDNEVAL AGLFHKMGGR AQTSTALSFG EKNGSIGYLV GEEHCGLKYM FHMMNEARIM
VGTSGAVLAV AGYQYSVDYA KNRPQGRLPS CKDPQSPMVN IIEHADVKRM LLAQKAYAEG
AMALVLYGTQ LSDDERTADT SEQREHAHTL LDFLTPIIKT WPSEYGPKAN SYAIQVMGGH
GYINEHPVEM FYRDNRLNPI HEGTTGIQSL DLITRKVPMN KMQGYKATLH EITKTIEQAK
QYDSLSEYTQ KLSEAVETLT LTTEAVLNGM ATKNIDLALA NSVKYLELFG HVIIAWLWLK
QSMVATKALA QQPHQADEFF YKGKLQASQY FYRFELPKIA VWSSLLRSTD STSFDMQADW
F
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