| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1573 |
|---|
| Symbol | |
|---|
| ID | 5161910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1734639 |
|---|
| End bp | 1736438 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640553488 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001234698 |
|---|
| Protein GI | 148260571 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.77864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGA TCGTCGACCG CCGCGACCTC GACTTCATCC TCTTCGACCT GCTCGGCATG
GAGGAGCTGC TCCGCCATCC GCATTTCGCC GCCTTCGACC GCGACGCCTG CACCCAGATG
CTCGACACCG CGCAGCAGAT CGCCGAGGAC CATTTCCTGC CCATCGCCGC CGAGGTGGAC
GCCAACGAGC CGCGCTTCGT CGGCGGACGG GTGGAGATGC CGGAAGGCAC CGGCCACGCC
CTGCGCGCCT GCGCCGAGGC GGGATTCTTC GCCCTGCCCT TCGCGCAGGA GCATGGCGGG
CTGCAGGCGC CGCGGGTGCT GCACACGGCG GCGAGCGGCA TCTTCACCTG TGCGAACACC
GCCGTCGCCA ATTACGCCTT CCTCACCGTC GGCGCCGCCA ACCTGCTCGC CGCCTTCGGC
GCCGAGCCGC TGCGCCGCCG CTTCCTGCCG CCGATGCTGG AGGGGCGCTG GTTCGGCACG
ATGTGCCTTT CCGAACCCCA GGCCGGATCG TCCCTCGCCG ACATCACCAC CACCGCCACC
CCGCGCGCCG ATGGCACGTT TTCGCTCCGC GGCAGCAAGA TGTGGATTTC GGGCGGGGAT
CAGGAAATAT CGGAGAACAT CGTCCACATG GTGCTGGCGC GCATCGCCGG CGCGCCGGCC
GGCACCCGCG GCATCTCGCT GTTTCTCGTG CCCAAGCGCC GCGTCGATGA AAGTGGCGCC
GTCGGCGAGA GCAACAACAT CGCCCTCGCC GGGCTGAACC ACAAGATGGG CCAGCGCGGC
ACCACCAACT GCCTGCTCAA TTTCGGCGAG AGCGGCGAGA CGATCGGCCA TCTGATCGGC
GCGCCGCATC GCGGCCTCGA ATACATGTTC CAGATGATGA ACGAGGCGCG CATCGGCGTC
GGCCATGCCG CGACCATGTC CGCCCTCGCC GGCTATCGCC ATTCGGCGGA CTACGCCCGC
ACCCGCACGC AAGGCCGCAG GGCCGGGCAG AAGGACCCGT CCGCCCCGCC GGTGCCGATC
GTCGAGCACG CCGATATCCG CCGCATGCTG CTGGCCCAGA AGGCGGCGGT GGAGGGCGCG
CAGGCGCTCT GCCTCTATGC CGCGCAGCTC GTCGACCGCC AGGAAATCGC CACGGACGCG
GATGAGAAAG CCTGGCTCGG CGCCCTGCTC GGGCTGCTCA CGCCGGTGGT GAAATCATGG
CCCTCGGAGC ATTGCCTCGA GGCCAACAAA TGGGCGATGC AGATTCTCGG CGGCTATGGC
TACACGCGGG ACTATCCGCT GGAGCGGCTC TATCGCGACA ACCGGCTGAA CCACATTCAC
GAAGGCACGT TCGGCATCCA GGGCATCGAC CTCGTGGGCC GCAAGCTCGG CGGCGACAAG
GGCGATGCGC TGCGCCGCTT CGCCGCACAG ATGCGCGAGA CCGCCGCCAC CGCCGCCCGG
CAGCCGGCCC TCGCGAACGA GGCCGCCCGC CTCGTGGCGG CACTCGACCA GCTCGGCGTC
ACCGCCGATG CCCTGCTCGC CTGCGCCGAC CTGCCGCGCC GCCTCGCCAA TGCCACGGTG
TTTCTCGATG CGTTCGGCCA TGTCGTCATC GGCTGGCTCT GGCTGTGGCA GGCGCTGGTC
GCGGCCACCG CGCTGGAAGG CAATCCCCCA GCGCCGGACA GGCTCTTTCA CGAGGGCAAG
ATACTGACAT GCCGTTATTT CATGGCGCAT GAACTGCCGC TTGGGATCGC CCGCCTCGCC
CTGTGCGCGA CGCTCGAGAC CACCAGCCTC GACGCCCCCG CCGCCCTGTT CGCCCTCTAG
|
|---|
| Protein sequence | MSMIVDRRDL DFILFDLLGM EELLRHPHFA AFDRDACTQM LDTAQQIAED HFLPIAAEVD
ANEPRFVGGR VEMPEGTGHA LRACAEAGFF ALPFAQEHGG LQAPRVLHTA ASGIFTCANT
AVANYAFLTV GAANLLAAFG AEPLRRRFLP PMLEGRWFGT MCLSEPQAGS SLADITTTAT
PRADGTFSLR GSKMWISGGD QEISENIVHM VLARIAGAPA GTRGISLFLV PKRRVDESGA
VGESNNIALA GLNHKMGQRG TTNCLLNFGE SGETIGHLIG APHRGLEYMF QMMNEARIGV
GHAATMSALA GYRHSADYAR TRTQGRRAGQ KDPSAPPVPI VEHADIRRML LAQKAAVEGA
QALCLYAAQL VDRQEIATDA DEKAWLGALL GLLTPVVKSW PSEHCLEANK WAMQILGGYG
YTRDYPLERL YRDNRLNHIH EGTFGIQGID LVGRKLGGDK GDALRRFAAQ MRETAATAAR
QPALANEAAR LVAALDQLGV TADALLACAD LPRRLANATV FLDAFGHVVI GWLWLWQALV
AATALEGNPP APDRLFHEGK ILTCRYFMAH ELPLGIARLA LCATLETTSL DAPAALFAL
|
|---|
| |