Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1305 |
Symbol | |
ID | 5694140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1557362 |
End bp | 1559176 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263899 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001529188 |
Protein GI | 158521318 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000712718 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAGC AACTGGCAGA CAGGCGGGAC ATCGATTTTG TCATCTGGGA ACAGCTCGAC GGCGAGAAGT TCATCAAGGA GGGCGGGTAT GCGGAGTTCA ACCGGAAGAC CTGCGACCTG ATCATCAACG AGGCACGCTC CCTGGCCATC AAGGAGATTC TGCCGTCTCT TGCCGAAAGC GATGAGATCG GTGTGAAGTT TGACAGCGGC ACGGTCACGG TGCCGGAATC CTTTGTCCCT TTGCGCAAGC TGATCCTGGA GGGTGAGTGG CAGAACCTGA TGGTGCCGCC GGAGATGGGC GGCCAGGGCG CCCCTCCCTT TGTGTCGGCC GCGGCCACCG AATATTTCAT GGCCGCCAAC TGGCCCCTGT TCACCTATGC CAGCCTGGGA TGCAGCACCG CCGGCATGAT TCAGCATCAC GGCACCGAAG AGCAGAAGAA AAAATATATT CCCAACCTGG TCTCCGGTAA ATGGGGCGGC ACCATGCTGC TCACCGAGCC CCAGGCCGGC ACCGACGTGG GCGCCATTGA GACATCGGCG GTCAAGAACC CGGACGGCAC CTATTCGCTG ACCGGCAACA AGATTTTCAT CACCAACGGC GAGCAGAACC TCACGGAAAA CATCATTCAC CCGGTTTTGG CCCGCATCGA GGGCCATGAT CCCGGCACCA AAGGCATCTC CATCTTCATC GTGCCCAAGT TCATGGTCAA TGACGACGGT TCCCTGGGCG AGCGCAACGA CATCGTCTGC ACCGGTACCG AGGAAAAGAT GGGCATTCAT GCCAGCGCCA CGTGCAGCAT GAGCCTGGGT TCCAAGGGCA AGTGCGTGGG CTTTCTGCTG GGTGAGGAAA AGCAGGGCAT GAAGATCATG TTCGAGATGA TGAACGAGGC CCGCATGGCC ACCGGTCTTC AGGCTTTTGC CTATGCGTCG GCCGCTTATC TGATCGCGGT GAACTACGCC AGGGAGCGGA TTCAGAGCCG GGATATCATG GATTACAAAA ATCCGGCGGC CCCCGGTGTG CCGATTATTA AACATCCGGA TGTGCGCAGA AACCTTTTGT GGATGAAGTC CATCGTGGAC GGCATGCGCA GCTTCTTCTA CTATACCGGT GTTGCGGGGA CAAAAGCCGA GATCGTGGAG GATGAAACCG AGCGGCGCCG CAACTCCGGC CTGTTCGAAC TGCTCACCCC CCTGATCAAG GAGTACCTGT CCTTCCGGGG CCACGAGGTG TGTGTCCAGG CCATGCAGGT GCTGGGCGGC TCCGGCTACA TCAAGGAGTA CCTGGTGGAG CAGTACACCC GGGACTGCAA GATCACTACC ATCTACGAGG GGTGCAGCGG CGTTCAGGCC ATGGACCTGC TGGGCCGCAA GCTGCCCATG GGCGGCGGCA AGGTGTTCGG CAGCTTCATG GACGAAATCA AGAAAACCGT TGAGGCGGCC AAACAGATTG ATGCCACCAG CGCGATGGCC CAGCAGATGG AAAAGGTCGC CAACCGCATG GCCGAAGTGG CCATGCACCT GGGCGTCACT GCCATGGAAG GCAAGCTCAG GGAGGCCTTT GCCCACTCCC TGCCGTTCCT TCATGCCATG GGGGACGTGA TCATGGCCTG GATGCTGCTG TGGCGGGCCG CTGTGGCGGC CCCGAAGATC GAGGACGCCA AGAAGAGCGA CGCGGCCTTC TACCAGGGCC AGGTCAAGAC CGCTGACTTT TTCATCCACA CCGCGCTGTA CGAGACCATG GGGGCCTTTG ATGCGATTCA GGCCACCTGC ACCGCGGCCC TTGATATTCC GGATGAAGGG TTTGGCGGTT TATAA
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Protein sequence | MAQQLADRRD IDFVIWEQLD GEKFIKEGGY AEFNRKTCDL IINEARSLAI KEILPSLAES DEIGVKFDSG TVTVPESFVP LRKLILEGEW QNLMVPPEMG GQGAPPFVSA AATEYFMAAN WPLFTYASLG CSTAGMIQHH GTEEQKKKYI PNLVSGKWGG TMLLTEPQAG TDVGAIETSA VKNPDGTYSL TGNKIFITNG EQNLTENIIH PVLARIEGHD PGTKGISIFI VPKFMVNDDG SLGERNDIVC TGTEEKMGIH ASATCSMSLG SKGKCVGFLL GEEKQGMKIM FEMMNEARMA TGLQAFAYAS AAYLIAVNYA RERIQSRDIM DYKNPAAPGV PIIKHPDVRR NLLWMKSIVD GMRSFFYYTG VAGTKAEIVE DETERRRNSG LFELLTPLIK EYLSFRGHEV CVQAMQVLGG SGYIKEYLVE QYTRDCKITT IYEGCSGVQA MDLLGRKLPM GGGKVFGSFM DEIKKTVEAA KQIDATSAMA QQMEKVANRM AEVAMHLGVT AMEGKLREAF AHSLPFLHAM GDVIMAWMLL WRAAVAAPKI EDAKKSDAAF YQGQVKTADF FIHTALYETM GAFDAIQATC TAALDIPDEG FGGL
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