More than 300 homologs were found in PanDaTox collection
for query gene Ndas_0483 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_0483  binding-protein-dependent transport systems inner membrane component  100 
 
 
291 aa  579  1e-164  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.125001  normal 
 
 
-
 
NC_013947  Snas_0621  binding-protein-dependent transport systems inner membrane component  65.34 
 
 
298 aa  377  1e-103  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1138  binding-protein-dependent transport systems inner membrane component  51.56 
 
 
290 aa  302  5.000000000000001e-81  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.204889 
 
 
-
 
NC_013525  Tter_0897  binding-protein-dependent transport systems inner membrane component  42.24 
 
 
303 aa  240  2e-62  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_5699  ABC transporter, permease  38.08 
 
 
300 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.202302  normal 
 
 
-
 
NC_013131  Caci_4520  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
301 aa  179  4.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.20807  normal  0.604183 
 
 
-
 
NC_010483  TRQ2_1597  binding-protein-dependent transport systems inner membrane component  37.26 
 
 
282 aa  174  9.999999999999999e-43  Thermotoga sp. RQ2  Bacteria  normal  0.951442  n/a   
 
 
-
 
NC_009486  Tpet_1547  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
285 aa  173  1.9999999999999998e-42  Thermotoga petrophila RKU-1  Bacteria  normal  0.107676  n/a   
 
 
-
 
NC_009718  Fnod_1555  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
280 aa  167  2e-40  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0590918  n/a   
 
 
-
 
NC_009954  Cmaq_0684  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
298 aa  160  2e-38  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.0527807 
 
 
-
 
NC_013745  Htur_4452  binding-protein-dependent transport systems inner membrane component  34.2 
 
 
372 aa  160  3e-38  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.173212  n/a   
 
 
-
 
NC_014165  Tbis_1658  binding-protein-dependent transporter inner membrane component  37.72 
 
 
302 aa  155  8e-37  Thermobispora bispora DSM 43833  Bacteria  normal  0.0488394  normal  0.487753 
 
 
-
 
NC_013744  Htur_3885  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
331 aa  155  1e-36  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.426528  n/a   
 
 
-
 
NC_013745  Htur_4665  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
343 aa  150  4e-35  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0048  binding-protein-dependent transport systems inner membrane component  34.83 
 
 
388 aa  149  6e-35  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.575298  normal 
 
 
-
 
NC_013202  Hmuk_1191  binding-protein-dependent transport systems inner membrane component  37.61 
 
 
342 aa  148  1.0000000000000001e-34  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013521  Sked_06410  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  37.07 
 
 
320 aa  147  2.0000000000000003e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.138967  normal 
 
 
-
 
NC_007333  Tfu_0912  ABC-type dipeptide/oligopeptide/nickel transport systems, permease components  33.33 
 
 
304 aa  147  3e-34  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0483  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
290 aa  145  6e-34  Sulfolobus solfataricus 98/2  Archaea  normal  0.377446  n/a   
 
 
-
 
NC_012669  Bcav_2726  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
303 aa  145  8.000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.576006 
 
 
-
 
NC_011661  Dtur_0216  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
280 aa  145  1e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0346829  n/a   
 
 
-
 
NC_012669  Bcav_3402  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
311 aa  144  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0264  binding-protein-dependent transport systems inner membrane component  35.22 
 
 
299 aa  143  3e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.502248  n/a   
 
 
-
 
NC_011312  VSAL_I2578  ABC-type [(GlcNAc)2] transporter, permease protein  30.03 
 
 
341 aa  143  4e-33  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013745  Htur_4464  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
330 aa  142  6e-33  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0131606  n/a   
 
 
-
 
NC_011883  Ddes_1215  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
278 aa  142  9e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2594  oligopeptide ABC transporter, permease protein  34.04 
 
 
285 aa  141  9.999999999999999e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0250  oligopeptide ABC transporter, permease protein  30.56 
 
 
307 aa  140  1.9999999999999998e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0243  oligopeptide ABC transporter, permease protein  30.9 
 
 
307 aa  140  1.9999999999999998e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013124  Afer_0173  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
309 aa  141  1.9999999999999998e-32  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.383419  n/a   
 
 
-
 
NC_006274  BCZK0211  oligopeptide ABC transporter, permease  30.9 
 
 
307 aa  140  3e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0220  oligopeptide ABC transporter permease  30.56 
 
 
307 aa  139  3.9999999999999997e-32  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0233  oligopeptide ABC transporter permease protein  30.56 
 
 
307 aa  139  3.9999999999999997e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0147  peptide ABC transporter, permease protein  33.91 
 
 
341 aa  139  3.9999999999999997e-32  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2075  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
344 aa  139  4.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_1035  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
276 aa  139  6e-32  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_013093  Amir_0763  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
312 aa  138  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0621  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
310 aa  138  1e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.0465132  n/a   
 
 
-
 
NC_008709  Ping_0547  peptide ABC transporter, protein inner membrane binding component  31.18 
 
 
327 aa  138  1e-31  Psychromonas ingrahamii 37  Bacteria  normal  0.0218475  normal 
 
 
-
 
NC_009783  VIBHAR_03425  hypothetical protein  34.35 
 
 
341 aa  137  2e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_2553  oligopeptide/dipeptide ABC transporter, permease protein  33.45 
 
 
304 aa  137  2e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2256  oligopeptide ABC transporter, permease component  33.45 
 
 
304 aa  137  2e-31  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_34910  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  30.04 
 
 
342 aa  137  2e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_2116  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
346 aa  137  3.0000000000000003e-31  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_011769  DvMF_0921  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
284 aa  137  3.0000000000000003e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.399737 
 
 
-
 
NC_013172  Bfae_20160  ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component  34.85 
 
 
621 aa  136  4e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.533008  n/a   
 
 
-
 
NC_010320  Teth514_0548  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
310 aa  136  4e-31  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0929  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
350 aa  136  4e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7458  peptide ABC transporter, permease protein  33.71 
 
 
281 aa  136  5e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.48372 
 
 
-
 
NC_010003  Pmob_0480  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
274 aa  135  7.000000000000001e-31  Petrotoga mobilis SJ95  Bacteria  normal  0.534309  n/a   
 
 
-
 
NC_002936  DET1492  peptide ABC transporter, permease protein  31.88 
 
 
279 aa  134  9.999999999999999e-31  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0916  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
280 aa  134  9.999999999999999e-31  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0894  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
280 aa  134  9.999999999999999e-31  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1282  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
279 aa  134  9.999999999999999e-31  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002584  (GlcNAc)2 ABC transporter permease component 2  33.48 
 
 
341 aa  134  1.9999999999999998e-30  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01330  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  31.06 
 
 
311 aa  134  1.9999999999999998e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_4092  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
322 aa  134  1.9999999999999998e-30  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0496567  n/a   
 
 
-
 
NC_013205  Aaci_1898  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
331 aa  133  3.9999999999999996e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3655  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
302 aa  133  3.9999999999999996e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0268  oligopeptide ABC transporter, permease protein  30.21 
 
 
307 aa  132  5e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1766  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
468 aa  132  5e-30  Clostridium cellulolyticum H10  Bacteria  normal  0.0164204  n/a   
 
 
-
 
NC_012669  Bcav_1400  ABC transporter related  33.21 
 
 
638 aa  132  7.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.785888  normal  0.726008 
 
 
-
 
NC_013131  Caci_2515  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
331 aa  132  7.999999999999999e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0878076  normal 
 
 
-
 
NC_013205  Aaci_2260  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
295 aa  132  7.999999999999999e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00197888  n/a   
 
 
-
 
NC_011366  Rleg2_5670  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
300 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0207  oligopeptide ABC transporter, permease  29.86 
 
 
307 aa  131  2.0000000000000002e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2796  binding-protein-dependent transport systems inner membrane component  27.7 
 
 
299 aa  130  3e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_1268  ABC-type dipeptide/oligopeptide/nickel transport systems, permease component  31.54 
 
 
279 aa  130  3e-29  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5669  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
302 aa  130  4.0000000000000003e-29  Delftia acidovorans SPH-1  Bacteria  normal  0.330271  normal  0.031338 
 
 
-
 
NC_011830  Dhaf_0455  binding-protein-dependent transport systems inner membrane component  29.97 
 
 
309 aa  129  5.0000000000000004e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2055  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
309 aa  129  5.0000000000000004e-29  Jannaschia sp. CCS1  Bacteria  hitchhiker  0.00634879  normal 
 
 
-
 
NC_010184  BcerKBAB4_0210  binding-protein-dependent transport systems inner membrane component  28.82 
 
 
307 aa  129  5.0000000000000004e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0247  oligopeptide ABC transporter, permease protein  29.17 
 
 
306 aa  129  5.0000000000000004e-29  Bacillus cereus B4264  Bacteria  normal  0.0546254  n/a   
 
 
-
 
NC_011772  BCG9842_B5078  oligopeptide ABC transporter, permease protein  29.11 
 
 
306 aa  129  5.0000000000000004e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2743  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
302 aa  127  1.0000000000000001e-28  Ruegeria sp. TM1040  Bacteria  normal  0.418739  normal 
 
 
-
 
NC_009674  Bcer98_0221  binding-protein-dependent transport systems inner membrane component  29.51 
 
 
307 aa  127  2.0000000000000002e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0490  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
277 aa  127  2.0000000000000002e-28  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0043  hypothetical protein  31.67 
 
 
269 aa  127  2.0000000000000002e-28  Methanocorpusculum labreanum Z  Archaea  normal  0.728589  normal  0.420247 
 
 
-
 
NC_009485  BBta_7556  putative dipeptide ABC transporter (permease protein)  32.27 
 
 
279 aa  127  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0385  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
343 aa  126  3e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.519425 
 
 
-
 
NC_009523  RoseRS_4597  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
344 aa  126  4.0000000000000003e-28  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3424  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
367 aa  125  6e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_1482  oligopeptide/dipeptide ABC transporter, ATPase subunit  30.3 
 
 
727 aa  125  7e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4283  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
292 aa  125  8.000000000000001e-28  Paracoccus denitrificans PD1222  Bacteria  normal  0.826823  normal 
 
 
-
 
NC_013522  Taci_0011  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
307 aa  125  1e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3511  oligopeptide ABC transporter (permease)  30.82 
 
 
317 aa  125  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2395  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
334 aa  125  1e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1613  oligopeptide ABC transporter, permease protein  30.93 
 
 
319 aa  124  1e-27  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_012858  Rleg_6686  binding-protein-dependent transport systems inner membrane component  29.52 
 
 
292 aa  125  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.340693  normal  0.469526 
 
 
-
 
NC_013526  Tter_2747  binding-protein-dependent transport systems inner membrane component  30.24 
 
 
288 aa  124  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4292  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
301 aa  125  1e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1901  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
371 aa  124  2e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1925  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
371 aa  124  2e-27  Cyanothece sp. PCC 8802  Bacteria  normal  0.866593  normal 
 
 
-
 
NC_013158  Huta_2587  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
383 aa  124  2e-27  Halorhabdus utahensis DSM 12940  Archaea  normal  0.32423  n/a   
 
 
-
 
NC_009654  Mmwyl1_1684  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
312 aa  124  2e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0130  binding-protein dependent transport system inner membrane protein  31.99 
 
 
306 aa  123  3e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0778  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
300 aa  123  3e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0620007  normal  0.517219 
 
 
-
 
NC_009952  Dshi_3009  ABC transporter related  33.9 
 
 
314 aa  124  3e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.450322 
 
 
-
 
NC_007925  RPC_2970  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
281 aa  123  4e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0153047  normal  0.258787 
 
 
-
 
NC_009832  Spro_2855  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
316 aa  123  4e-27  Serratia proteamaculans 568  Bacteria  normal  normal  0.13229 
 
 
-
 
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