| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0385 |
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| Symbol | |
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| ID | 5537847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 483263 |
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| End bp | 484294 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892548 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001430535 |
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| Protein GI | 156740406 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.519425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG CAGACCAGAC AATGACCCCA TCCGTATCTG ATGCCGCTGC AACGATCCGC
CAGTTGCAAC TTGGCGTGTC GTCGAAGCCG CGCACGCTGC TGGGAGACGC CTGGCGCCGG
TTCCGCCGCC ACACGCTGGC AATGATCGGG GTCGGCGTTC TCGTGTTTAT GACGCTGGCT
GTGACTGTCG GCGCCTGGTG GTATGAACGC TACCTGGTGG AGCAGTTGGC GCAGTCGGGC
ATGCCGGTGA CGGCGGAGAA CCCCGATATT CGCGTTTTGA TCGATCATCT CGATTTTCTG
GCGTTGCTGT CGCCGCCGAC GCATGTGCAT CCCTTTGGCA CCGACGACCT GGGGCGCGAT
CTGCTGGCGC GCTGCATCTA TGGCGGGCGT GTGTCGCTGG CAGTCGGTTT TGTGGCGATG
CTGATCGCCA TTTCGCTCGG AACGATCATT GGCGCTGCGG CGGGCTTCTT TGGCGGACTG
GTCGATCAGG CGTTGATGCG GCTGACCGAT CTGTTTCTGT CGCTGCCCTC CGTGCCGCTG
ATTCTGTTGA CGGTCTATCT ATTCCGCGAT CCGGTGATTC AGGCAATGGG GTCGCCGGAG
GCGGGTATCT TTGTGATCGT GGTGACGGTG ATCGGTGCGC TGGCGTGGAT GCAGACGGCG
CGCGTGGTGC GCGCAACGTT TCTTTCGCTC AAGGAAAAGG AGTTTGTTGA GGCGGCGCGC
TGCCTGGGCA TCAGCCAAAC GGCAATTATG TTCCGCCATA TCCTGCCGAA TGCTATCAGC
CCGATTATCG TCGCTGCCAC ATTGGAAATC GGCAGCGCAA TCATCGCCGA GTCGACCCTC
TCCTTCCTCG GTGTCGGATT TCCACCCGAC ACGCCGACGT GGGGACGCCT GGTGACCGAT
GGGAGTCAGT ATCTCCAGGC GGCGCCCTGG CTGGCGCTCA TTCCGGGTGC GCTGATCTTC
CTAACGGTGC TAAGTATCAA CTTCATGGGT GATGGGTTGC GCGACGCGCT CGATCCGAGG
TCGAGGCTTT AG
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| Protein sequence | MSEADQTMTP SVSDAAATIR QLQLGVSSKP RTLLGDAWRR FRRHTLAMIG VGVLVFMTLA
VTVGAWWYER YLVEQLAQSG MPVTAENPDI RVLIDHLDFL ALLSPPTHVH PFGTDDLGRD
LLARCIYGGR VSLAVGFVAM LIAISLGTII GAAAGFFGGL VDQALMRLTD LFLSLPSVPL
ILLTVYLFRD PVIQAMGSPE AGIFVIVVTV IGALAWMQTA RVVRATFLSL KEKEFVEAAR
CLGISQTAIM FRHILPNAIS PIIVAATLEI GSAIIAESTL SFLGVGFPPD TPTWGRLVTD
GSQYLQAAPW LALIPGALIF LTVLSINFMG DGLRDALDPR SRL
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