| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2553 |
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| Symbol | |
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| ID | 4203107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2812894 |
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| End bp | 2813808 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638083420 |
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| Product | oligopeptide/dipeptide ABC transporter, permease protein |
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| Protein accession | YP_696943 |
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| Protein GI | 110801186 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAACAG AATTAAATAA AGAAGTTAAA GTTAAAAAAG AGAAAATAGA AAGCCCTTGG
ACTGTAGCTT TTAAAAGATT GAAAAAAAAT AAGCTAGCTT TAGGTGGCTT ATTTATATTG
TTGGTCTTAG TTTTAATTTC AATATTAGGA CCAATGTTAT ATCCACATGA TCATTTAACA
ATAGATTTAG TAAGAACTAA TCAACCACCA TCAGCGCAGC ATTGGCTAGG AACTGATGAA
TCTGGAAGAG ATGTTTTAGC TAGACTTATG TACGGGGGAA GATATTCACT TTCAATAGGT
ATAGTTGCGG TAGGAATTTC TATAATTATA GGAACAACTT TGGGGATATT AGCAGGATAT
TATGGAGGAT TTATAGATAG TTTAATTATG AGAATTGTTG ACGTATTTAT GTGTTTCCCA
TTCTTATCAT TATTAATAAT GGTATCTGCT ATAATGTCAG ATTTAAAAAT ACCACCAGAG
TATAGAATTT TTGTAGTTAT GTTTATTATA GGGGCACTGA GTTGGACTGG TACTTGTCGT
ATGGTTAGAG GTATGGTCTT ATCTTTAAGA GAACAAGAAT TTATGCAAGC GGCAGAAGCT
TTAGGTCTAT CAGATGCTAG AAAAATGTTT TTACACTTAT TACCTAATAC ATTAGCAGTT
ATTATAGTTT CAGCTACATT AGGAATTGGT GGAGCTATAT TAACTGAATC ATCTTTAAGT
TTCTTAGGTC TTGGAGTTAC ACCTCCTACA CCAACTTGGG GTAATATGAT ACAAACAGCT
CAAGATTACT ATACATTAAC AAATAGATGG TGGTTATGGA TACCTCCAGG AGTATGTATA
TTCTTAACTG TTATATCTAT AAATATTTTT GGAGATGGAT TAAGAGATGC TCTAGATCCT
AAGCTAAAGG TCTAA
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| Protein sequence | MQTELNKEVK VKKEKIESPW TVAFKRLKKN KLALGGLFIL LVLVLISILG PMLYPHDHLT
IDLVRTNQPP SAQHWLGTDE SGRDVLARLM YGGRYSLSIG IVAVGISIII GTTLGILAGY
YGGFIDSLIM RIVDVFMCFP FLSLLIMVSA IMSDLKIPPE YRIFVVMFII GALSWTGTCR
MVRGMVLSLR EQEFMQAAEA LGLSDARKMF LHLLPNTLAV IIVSATLGIG GAILTESSLS
FLGLGVTPPT PTWGNMIQTA QDYYTLTNRW WLWIPPGVCI FLTVISINIF GDGLRDALDP
KLKV
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