| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3885 |
|---|
| Symbol | |
|---|
| ID | 8744513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 117210 |
|---|
| End bp | 118205 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646514469 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003405416 |
|---|
| Protein GI | 284167138 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.426528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACG AACGACCCGA CGACGAACTC GAGACGCTGT TCGACGCGGA CATCGACCGA
GAGCCGACGC CGCGGTCCCA GCGGCTCAAG CGACAGTTCG ACCTGTACGT CGTCGCCCCC
GCCCGGGTGG CGATGACCGA CTGGCGAGCC GTCGTCGGGA CGGCGATCAT CACGATATTC
TTCCTGATGG GAACTGTCGG CGTCTGGCTC GTCGACAGAC CGACGAGCGG GGATGCGCCC
GTTCTCGAAC CGCCGTTCCA GAACCCCAAC TACATTCTCG GGACGGACAC CTTCGGGCAG
CCGATCGGGG CGCAACTCAT CCACGCGACG CCGGACATGT TCCGAATGGT GTTCGCCGGA
GCGGTCGTGA GCGTCGGGTT CGCGGCGCTG GTCGGCATCC TTTCGGGGTT CCTCCGTGGC
TCGAAGATCG ACACGATACT GATGTCGATC ACCGACATCA TCATCACCAT CCCCGGACTC
CCGCTGGTCA TCGTCCTCAT CGCGATCTTC CAGCCCAGAG ACCCGTACGT CATCGGCGTC
TTGCTCGGGC TCGACAACTG GCCCGGGCTG GCGAGGACCG TACGCTCACA GGTGCTCAGC
ATCCGGGAGG AGTCGTACGT GGAGGCCTCG CAGATCATGG GCGTCTCGAC GGGGACGATC
CTCCGCCGGG ACGTCCTCGC CCAGCTGATG CCGTACATCA CGGTGAACTC GGCGCTGGCC
TCTCGACGCA TCATCTTTGA GTCCGTCGGG CTGTACTTCC TCGGGATCCT CCCGTTCACG
ACGTTCAACT GGGGCGTCAT GATGAACATC GCCTACGAGG GGCAAGCGCT GAGTCGGCCG
GACATGTACC ACTTCCTCGC GTTCCCGTTA CTGACGATCT TCCTGATGTC GTTCGGACTC
GTGTTGTTCT CCCAGGGGAT GGACAGCGTG TTCAACGTCC GACTCAGGGC GCGTCACTCG
TCGACGATCG ACGACGACGG AGGTCCCGAA CCATGA
|
|---|
| Protein sequence | MSNERPDDEL ETLFDADIDR EPTPRSQRLK RQFDLYVVAP ARVAMTDWRA VVGTAIITIF
FLMGTVGVWL VDRPTSGDAP VLEPPFQNPN YILGTDTFGQ PIGAQLIHAT PDMFRMVFAG
AVVSVGFAAL VGILSGFLRG SKIDTILMSI TDIIITIPGL PLVIVLIAIF QPRDPYVIGV
LLGLDNWPGL ARTVRSQVLS IREESYVEAS QIMGVSTGTI LRRDVLAQLM PYITVNSALA
SRRIIFESVG LYFLGILPFT TFNWGVMMNI AYEGQALSRP DMYHFLAFPL LTIFLMSFGL
VLFSQGMDSV FNVRLRARHS STIDDDGGPE P
|
|---|
| |