Gene Hmuk_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1191 
Symbol 
ID8410711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1132997 
End bp1134025 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content63% 
IMG OID645019527 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003177024 
Protein GI257387251 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGA AGCATACTGA CTCAGACACG GACGGTGAAG AGTTCGTCTT CGAAACACAG 
ACCTCGACTG TCGAAACGTC TCGCAGCGAA CGACTGCGAG ACTTCTACGA GGAGTTCATC
TACAAGCCGG GTCTCGTCGC CCTCGACGAC TCGCGGACCC TCATCGGCGG CGTGATCCTC
TTCGTGTTCA TCCTCATCGC ACTGATCGGA ACGCGGGTGT ATCCCGCACC GGTCACCAAC
CAGGTCGAGC GGAGCCTCAA GCCGTTCGAG ACGATGAACG CACCGCTGGG ATCGAACCCG
TCGGGCACCG ACCTCCTCGC GCAGGTCATC CACGCGACGC CGTCGATGCT GATCCTGGTG
ACCGCGGGTG CGGTCTTCTC GACGTTCATC GCGGTCTTTA CCGGGACCGT CTCGGGATAC
AAGGGCGGTA CGACCGACCG CGTCATCACG ACGATCTCGG ACATCGCGAT GTCGATCCCG
GGGCTCCCGC TGGTGATGGT GCTGGCCGTG ACCATCAAGC CCGAGAATCC GGCCGTCGTG
GGGATCCTCC TCACGATCAA CTACTGGTCG GGGCTCGGCC GAGCGATCCG GTCGCAGGTG
CTGACGCTGC GCGAGGAGTC GTACGTCGAG GCCTCGCGGA CGATGGGTGT GAGCACTCGA
CGGATCCTGA CGAAAGACAT TATCCCGAAC CTGATGCCGT ACATCCTGGT CAACTTCGCG
TTCGCCGCGC GATACTGCAT CTTCGCTGGC GTCGGGCTGT ACTACCTCGG CGTGTTGCCG
GCGGACCTGG CAAACTGGGG ACTCCAACTC GACAGTGCGT ACAACGACTA CAGCGCACTC
GTCGGGAGCG GCTCGGAGTA TCTGGTGATC GTTCCGATGA TCCCCATCGC TCTGCTGTCG
CTCTCGCTGG TGTTGCTCGC CCAGGGCCTC GACCGGATCT TCAATCCGCG CGTTCGCACT
CGGCTGGCCG GGGAGTCGGA GTCGATCGAA GAAGAGGACG ACGACGTCGT CCACACGGGG
GGCGTCTAA
 
Protein sequence
MQVKHTDSDT DGEEFVFETQ TSTVETSRSE RLRDFYEEFI YKPGLVALDD SRTLIGGVIL 
FVFILIALIG TRVYPAPVTN QVERSLKPFE TMNAPLGSNP SGTDLLAQVI HATPSMLILV
TAGAVFSTFI AVFTGTVSGY KGGTTDRVIT TISDIAMSIP GLPLVMVLAV TIKPENPAVV
GILLTINYWS GLGRAIRSQV LTLREESYVE ASRTMGVSTR RILTKDIIPN LMPYILVNFA
FAARYCIFAG VGLYYLGVLP ADLANWGLQL DSAYNDYSAL VGSGSEYLVI VPMIPIALLS
LSLVLLAQGL DRIFNPRVRT RLAGESESIE EEDDDVVHTG GV