Gene Mlab_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0043 
Symbol 
ID4795122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp46338 
End bp47147 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content54% 
IMG OID640098688 
Producthypothetical protein 
Protein accessionYP_001029488 
Protein GI124484872 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.728589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.420247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTCG ACCGGCGGTA TATCCTTCCG GGTCTTCTGA TCCTGATATT CTTGATCGTT 
GCGATCTTTC CGGGGATGTT TGCTCCGTAC TCGATCAGCG ATCGAACTGC TACCTATCAG
GCACCGAGTG CCGAACATCT TCTTGGAACC GACAATATGG GAAAGGACAT CTTCTCCCTC
CTGATCTATG CAGCCAGATG GACGCTGACG ATCGGATTCG CCTCCGGTCT TCTTGCCGTG
TGTGTGGGAA CCGGTTTTGG TCTTCTTGCC GGCTGGAGAA GAGGAGTCCT GGATGAGTTT
TTGATGGGAA CGACGGATAT CGTTCTTATT CTCCCGAAGA TCCCTCTGGT GATTATTCTC
GCCGCATATC TCGGCCCGAG TCCATGGGTT CTGATCTTCG TTCTGGGGCT TTTGTCCTGG
GAATCGATCG CCCGGGTCGT GCGTTCGAAA GTTATTCAGA TCCGGTCGTC CGAGTATATT
CTCGCCGCTC GGTGTCTGGG ATTTTCGGAT TGCCGGATCA TGTTCAAAGA GATATTACCC
GTGGTTTTTC CGGTGATCGT GCCGAAGTTC GTTCTGGTTA CGGCGGCGGC GATGATCTCG
GAGGCATCTC TCGCGTTTCT TGGGCTTTCC GATCCACAAA CGGTTTCGTG GGGAGGCATG
ATCTCGGACG CCTTTACCTA CAGCGGGTTC CTTCGCGGCA TGTGGTACTG GTGGCTCCCT
CCGGCATTAT GCATCATTCT CGGAGTTCTG GCGATCACGA GTCTTGCCTT CATCCATGAA
CGCGGTGTTC GCGAGGTGAT GCAGTTATGA
 
Protein sequence
MKFDRRYILP GLLILIFLIV AIFPGMFAPY SISDRTATYQ APSAEHLLGT DNMGKDIFSL 
LIYAARWTLT IGFASGLLAV CVGTGFGLLA GWRRGVLDEF LMGTTDIVLI LPKIPLVIIL
AAYLGPSPWV LIFVLGLLSW ESIARVVRSK VIQIRSSEYI LAARCLGFSD CRIMFKEILP
VVFPVIVPKF VLVTAAAMIS EASLAFLGLS DPQTVSWGGM ISDAFTYSGF LRGMWYWWLP
PALCIILGVL AITSLAFIHE RGVREVMQL