| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2055 |
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| Symbol | |
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| ID | 3934508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2060228 |
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| End bp | 2061157 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904411 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509997 |
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| Protein GI | 89054546 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00634879 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATG TTCCCGAGGT TCAAACCAAC CTGACCCGCC GCCAGAAGCG CCGGATGAAG
CGGTTCGACA ATCCATGGCG CAACCCCAAG CTGATCTGGG GCGCGGCGCT TTTGCTTGGC
GTCGTCGCGC TTGGCATCCT GGGGCGCTTG TTTTGGGATA CGGATCTGGT CTTCACCGGA
TCGTCGCCTG CACGGCTTCC TCCGCCGGGG TTTGAAAACC TGCGCGGGCA GGCGGGGCAG
ATCGCCCACC CGCTTGGCAC CGATGTGGCG GGCAAGGATA TGCTGGCGCT GCTGATCGTG
GGCGCGCCGA ATTCACTGTT CGTGGGGTTG TTAGCTTCTC TGATCGGGAT GAGCATTGGC
ATCTTTCTCG GCTTCTCCGC AGGCTTCATG CGCGGGCGCA TCGACGACGT GATCCGTGTG
GGATCGGACG TGATGATCAC CATTCCGCCG CTGTTGATCC TGGTGGTCTT TCAGGCCGCC
TATGGGGACA TATCGCTGAC CATGATGGCG GTGTTGATCG CGGCCTTCGT CTGGCAATCG
CCCACCCGCC TGATCCGCGC GCAGGTCCTG TCCATGCGCG AGAGCGGTTA CGTCCAGATG
GCCCGCCTCT CGGGTGCATC GACCATGCAC ATTATGTTCC GCGAGATGTT GCCGAACCTG
GTGCCGTACC TGTTCGGGTC GTTCATCGCC AATGTAACCA CGGCTATTGT CACGGCCGTG
GGGCTGGAGG TTCTGGGCCT TGGTCCCCAG CGCATCCCAA CCCTTGGCCG TGTGATCTAC
GACGCCATCA ACTCCGGTGC CTTGATCCAG AACCTCTGGT GGTGGTGGGG CATCCCAACG
CTGCTGCTGG CGGTGATGTT CATCGGGCTC TTGCTGGTGA ACCTCGGCCT TGATGAAGTC
TCCAACCCCC GCCTGCGGAG GCTGTCATGA
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| Protein sequence | MTHVPEVQTN LTRRQKRRMK RFDNPWRNPK LIWGAALLLG VVALGILGRL FWDTDLVFTG
SSPARLPPPG FENLRGQAGQ IAHPLGTDVA GKDMLALLIV GAPNSLFVGL LASLIGMSIG
IFLGFSAGFM RGRIDDVIRV GSDVMITIPP LLILVVFQAA YGDISLTMMA VLIAAFVWQS
PTRLIRAQVL SMRESGYVQM ARLSGASTMH IMFREMLPNL VPYLFGSFIA NVTTAIVTAV
GLEVLGLGPQ RIPTLGRVIY DAINSGALIQ NLWWWWGIPT LLLAVMFIGL LLVNLGLDEV
SNPRLRRLS
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