Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2260 |
Symbol | |
ID | 8425788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2319747 |
End bp | 2320634 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645028380 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003185658 |
Protein GI | 258512224 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00197888 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCACAG AGACGCAGGT GACAAATTCC GCAGGCGAGC CGCGCGTGCA GGCCACGAAG TGGCGCACGT GGAAGCGGTT CTGGCGGTAT CCGCTGAGCT CGATTGGCGT GATCGGCATG GTGCTCCTGT TTGCCTTCTG CTTCGTGGGC CCGCTGCTCT ATCACGTCAG TCCGACGCAG GGGGATTTCA CCGCGCTGCT CCAACCGCCG AGCGCCAAGC ATCCGCTGGG CACGGACGAC GCGGGTCACG ACGTGCTCGC GCGCATGATG GTGGGCGGTC AGGCGTCGCT CGAAGTCGGC TTCCTGTCGG CTCTCGTCGC GATGGCGTTT GGAACGCTGT ACGGCATGGT GAGCGCGCTC GCGGGCGGCT GGGTGGACAT CGTCCTGATG CGTATCGTGG ACATCCTGCT GTCCATTCCG AGCATCTTCA TCCTGCTGTT CCTGAACGCG ACGTTCAAAC CGAACGTGGG TCTCATGATC TTCGTGCTCG CTGCGACCAG CTGGCTCGGC GTGAGCCGTA TCGTCCGCGG TGAAGTGTTG AAGATCAAGA ACGAGACGTA CGTCGAGGCG GCGCTCTTGG CGGGCGTGCG AACGTGGCGG CTGATGACCA AATATCTGGT TCCGAACTTT ATCGGAACCG TGTTGGTGAC CACGACCTTC GCAGTCGCAG ACTCCATTCT CTCGATTGCG GGTCTATCAT TCCTGGGACT CGGGTTGCCG CCCCCGGCGC CGAACTGGGG TGCCGATCTG TCGGCTGCGA TGAACTACAT CTTCCAGAAC GCGTGGTGGC TCATCTATCC GCCAGGCATT CTGATCTTGT GCTCGCAGCT GTTCGTGAAC TTCATCGGCG ATGGCCTGCG CCATGCGCTT GAAACGCGCA CCGACTGA
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Protein sequence | MVTETQVTNS AGEPRVQATK WRTWKRFWRY PLSSIGVIGM VLLFAFCFVG PLLYHVSPTQ GDFTALLQPP SAKHPLGTDD AGHDVLARMM VGGQASLEVG FLSALVAMAF GTLYGMVSAL AGGWVDIVLM RIVDILLSIP SIFILLFLNA TFKPNVGLMI FVLAATSWLG VSRIVRGEVL KIKNETYVEA ALLAGVRTWR LMTKYLVPNF IGTVLVTTTF AVADSILSIA GLSFLGLGLP PPAPNWGADL SAAMNYIFQN AWWLIYPPGI LILCSQLFVN FIGDGLRHAL ETRTD
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