Gene Aaci_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2260 
Symbol 
ID8425788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2319747 
End bp2320634 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content62% 
IMG OID645028380 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003185658 
Protein GI258512224 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00197888 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCACAG AGACGCAGGT GACAAATTCC GCAGGCGAGC CGCGCGTGCA GGCCACGAAG 
TGGCGCACGT GGAAGCGGTT CTGGCGGTAT CCGCTGAGCT CGATTGGCGT GATCGGCATG
GTGCTCCTGT TTGCCTTCTG CTTCGTGGGC CCGCTGCTCT ATCACGTCAG TCCGACGCAG
GGGGATTTCA CCGCGCTGCT CCAACCGCCG AGCGCCAAGC ATCCGCTGGG CACGGACGAC
GCGGGTCACG ACGTGCTCGC GCGCATGATG GTGGGCGGTC AGGCGTCGCT CGAAGTCGGC
TTCCTGTCGG CTCTCGTCGC GATGGCGTTT GGAACGCTGT ACGGCATGGT GAGCGCGCTC
GCGGGCGGCT GGGTGGACAT CGTCCTGATG CGTATCGTGG ACATCCTGCT GTCCATTCCG
AGCATCTTCA TCCTGCTGTT CCTGAACGCG ACGTTCAAAC CGAACGTGGG TCTCATGATC
TTCGTGCTCG CTGCGACCAG CTGGCTCGGC GTGAGCCGTA TCGTCCGCGG TGAAGTGTTG
AAGATCAAGA ACGAGACGTA CGTCGAGGCG GCGCTCTTGG CGGGCGTGCG AACGTGGCGG
CTGATGACCA AATATCTGGT TCCGAACTTT ATCGGAACCG TGTTGGTGAC CACGACCTTC
GCAGTCGCAG ACTCCATTCT CTCGATTGCG GGTCTATCAT TCCTGGGACT CGGGTTGCCG
CCCCCGGCGC CGAACTGGGG TGCCGATCTG TCGGCTGCGA TGAACTACAT CTTCCAGAAC
GCGTGGTGGC TCATCTATCC GCCAGGCATT CTGATCTTGT GCTCGCAGCT GTTCGTGAAC
TTCATCGGCG ATGGCCTGCG CCATGCGCTT GAAACGCGCA CCGACTGA
 
Protein sequence
MVTETQVTNS AGEPRVQATK WRTWKRFWRY PLSSIGVIGM VLLFAFCFVG PLLYHVSPTQ 
GDFTALLQPP SAKHPLGTDD AGHDVLARMM VGGQASLEVG FLSALVAMAF GTLYGMVSAL
AGGWVDIVLM RIVDILLSIP SIFILLFLNA TFKPNVGLMI FVLAATSWLG VSRIVRGEVL
KIKNETYVEA ALLAGVRTWR LMTKYLVPNF IGTVLVTTTF AVADSILSIA GLSFLGLGLP
PPAPNWGADL SAAMNYIFQN AWWLIYPPGI LILCSQLFVN FIGDGLRHAL ETRTD