More than 300 homologs were found in PanDaTox collection
for query gene Hoch_5448 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_5448  response regulator receiver protein  100 
 
 
130 aa  261  2e-69  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.122497 
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  36.22 
 
 
1180 aa  88.2  4e-17  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_007973  Rmet_1542  response regulator receiver domain-containing protein  37.74 
 
 
309 aa  87.4  6e-17  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000150385  normal  0.319028 
 
 
-
 
NC_008312  Tery_3155  adenylate/guanylate cyclase  39.29 
 
 
1172 aa  87.4  6e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  0.386213  hitchhiker  0.00095291 
 
 
-
 
NC_008340  Mlg_2012  two component, sigma54 specific, Fis family transcriptional regulator  40.57 
 
 
484 aa  85.5  2e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1161  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
496 aa  84.3  5e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.175427  normal 
 
 
-
 
NC_010681  Bphyt_1289  response regulator receiver protein  35.83 
 
 
134 aa  83.2  0.000000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.295021  normal  0.0758601 
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  35.43 
 
 
1156 aa  82.4  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  36.7 
 
 
486 aa  82.4  0.000000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal 
 
 
-
 
NC_007760  Adeh_3472  response regulator receiver sensor signal transduction histidine kinase  41.18 
 
 
520 aa  81.3  0.000000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2184  two component, sigma54 specific, Fis family transcriptional regulator  37.74 
 
 
497 aa  80.5  0.000000000000007  Xanthobacter autotrophicus Py2  Bacteria  normal  0.682977  normal  0.229753 
 
 
-
 
NC_009485  BBta_2012  two component, sigma54 specific, Fis family transcriptional regulator  37.5 
 
 
485 aa  80.1  0.000000000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  36.11 
 
 
495 aa  80.1  0.000000000000009  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2949  response regulator receiver domain-containing protein  32.8 
 
 
332 aa  80.1  0.000000000000009  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  33.61 
 
 
557 aa  79.3  0.00000000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2808  two component, sigma54 specific, Fis family transcriptional regulator  35.14 
 
 
482 aa  79.3  0.00000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2813  response regulator receiver sensor signal transduction histidine kinase  33.93 
 
 
377 aa  76.6  0.0000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.963287  n/a   
 
 
-
 
NC_008687  Pden_3109  two component, sigma54 specific, Fis family transcriptional regulator  36.79 
 
 
493 aa  76.6  0.0000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  35.04 
 
 
317 aa  76.3  0.0000000000001  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_007347  Reut_A2812  response regulator receiver  34.45 
 
 
335 aa  75.9  0.0000000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.101507  n/a   
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  34.19 
 
 
806 aa  73.6  0.0000000000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_0662  response regulator receiver (CheY) and GAF modulated Serine phosphatase  31.15 
 
 
557 aa  73.6  0.0000000000009  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00161844  normal  0.0426655 
 
 
-
 
NC_007493  RSP_0507  HupR response regulator  34.26 
 
 
491 aa  72.8  0.000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1525  ATP-binding region ATPase domain protein  35.24 
 
 
359 aa  73.2  0.000000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.331233  normal  0.636632 
 
 
-
 
NC_010725  Mpop_0541  response regulator receiver sensor hybrid histidine kinase  36.07 
 
 
575 aa  72  0.000000000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0862  response regulator receiver protein  35.71 
 
 
293 aa  72  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.747276  normal  0.358 
 
 
-
 
NC_013132  Cpin_1315  response regulator receiver sensor signal transduction histidine kinase  33.05 
 
 
365 aa  72.8  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2691  response regulator receiver domain-containing protein  33.04 
 
 
134 aa  72.8  0.000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1179  sigma-54 factor, interaction region  36.89 
 
 
482 aa  72.4  0.000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0557788  normal 
 
 
-
 
NC_009049  Rsph17029_2158  two component, sigma54 specific, Fis family transcriptional regulator  34.26 
 
 
491 aa  72.8  0.000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00791251  normal  0.142838 
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  36.84 
 
 
553 aa  72.8  0.000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3364  hydrogenase accessory protein HypB  35.19 
 
 
492 aa  72  0.000000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.224656 
 
 
-
 
NC_008312  Tery_3971  putative GAF sensor protein  31.97 
 
 
312 aa  71.6  0.000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2496  two component, sigma54 specific, Fis family transcriptional regulator  31.48 
 
 
495 aa  71.6  0.000000000003  Magnetococcus sp. MC-1  Bacteria  normal  0.0534594  normal  0.148721 
 
 
-
 
NC_007413  Ava_1423  response regulator receiver (CheY) and GAF domain-containing protein  34.17 
 
 
315 aa  71.6  0.000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  39.64 
 
 
473 aa  71.6  0.000000000004  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  33.93 
 
 
823 aa  71.2  0.000000000004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3477  PAS/PAC sensor hybrid histidine kinase  33.07 
 
 
1465 aa  71.2  0.000000000004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3757  two component, sigma54 specific, Fis family transcriptional regulator  36.89 
 
 
499 aa  71.2  0.000000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4268  histidine kinase  36.52 
 
 
575 aa  70.5  0.000000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.396925 
 
 
-
 
NC_011004  Rpal_1171  two component, sigma54 specific, transcriptional regulator, Fis family  35.92 
 
 
482 aa  70.1  0.00000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2689  response regulator receiver domain-containing protein  31.09 
 
 
339 aa  70.1  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.579235  normal 
 
 
-
 
NC_009675  Anae109_3069  response regulator receiver protein  35.4 
 
 
140 aa  70.1  0.00000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.334039  normal  0.526038 
 
 
-
 
NC_014148  Plim_3060  response regulator receiver  33.64 
 
 
410 aa  68.9  0.00000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3556  multi-sensor signal transduction histidine kinase  40.17 
 
 
523 aa  68.9  0.00000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4751  response regulator receiver sensor signal transduction histidine kinase  30.91 
 
 
384 aa  68.6  0.00000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0259995  normal  0.0850645 
 
 
-
 
NC_007492  Pfl01_4550  response regulator receiver domain-containing protein  34.55 
 
 
451 aa  68.9  0.00000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.01769  normal 
 
 
-
 
NC_011891  A2cp1_3624  multi-sensor signal transduction histidine kinase  40.17 
 
 
523 aa  69.3  0.00000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1854  histidine kinase  36.13 
 
 
1111 aa  68.6  0.00000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.131557  normal 
 
 
-
 
NC_008554  Sfum_1007  PAS/PAC sensor hybrid histidine kinase  32.82 
 
 
557 aa  68.9  0.00000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.607179  normal 
 
 
-
 
NC_010814  Glov_1568  response regulator receiver protein  32.11 
 
 
262 aa  68.6  0.00000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1271  hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase  36.43 
 
 
1499 aa  68.6  0.00000000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.422796  n/a   
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  34.45 
 
 
379 aa  68.6  0.00000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_009943  Dole_3263  PAS/PAC sensor hybrid histidine kinase  34.71 
 
 
639 aa  68.2  0.00000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6071  response regulator receiver protein  35.19 
 
 
130 aa  67.8  0.00000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0826373  normal 
 
 
-
 
NC_003295  RSc2738  response regulator transcription regulator protein  29.92 
 
 
336 aa  67.8  0.00000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1291  response regulator receiver protein  31.09 
 
 
336 aa  67.8  0.00000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.127237  normal  0.0846123 
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  32.48 
 
 
154 aa  67.8  0.00000000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_007204  Psyc_0720  response regulator receiver, fis type  30.83 
 
 
312 aa  67.4  0.00000000006  Psychrobacter arcticus 273-4  Bacteria  normal  0.935409  normal 
 
 
-
 
NC_009767  Rcas_1273  multi-sensor signal transduction histidine kinase  37.74 
 
 
556 aa  67  0.00000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.12815  normal  0.758765 
 
 
-
 
NC_012856  Rpic12D_2567  response regulator receiver protein  31.09 
 
 
339 aa  67  0.00000000008  Ralstonia pickettii 12D  Bacteria  normal  normal  0.342173 
 
 
-
 
NC_012918  GM21_3739  response regulator receiver sensor signal transduction histidine kinase  33.61 
 
 
379 aa  66.6  0.0000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_003295  RSc2737  two component response regulator transcription regulator protein  29.82 
 
 
374 aa  66.2  0.0000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_4102  two component, sigma54 specific, Fis family transcriptional regulator  33.01 
 
 
475 aa  66.6  0.0000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2977  response regulator receiver protein  31.09 
 
 
339 aa  66.6  0.0000000001  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2723  putative PAS/PAC sensor protein  37.14 
 
 
285 aa  66.6  0.0000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2289  response regulator receiver protein  33.33 
 
 
135 aa  66.2  0.0000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3291  response regulator receiver domain-containing protein  36.84 
 
 
592 aa  65.5  0.0000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2960  PAS/PAC sensor hybrid histidine kinase  36.13 
 
 
622 aa  65.5  0.0000000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  33.33 
 
 
456 aa  66.2  0.0000000002  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_007952  Bxe_B2007  response regulator receiver sensor signal transduction histidine kinase  30 
 
 
388 aa  65.9  0.0000000002  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.000116465  normal  0.0324755 
 
 
-
 
NC_008463  PA14_26830  putative two-component response regulator  36.54 
 
 
303 aa  66.2  0.0000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0364  multi-sensor hybrid histidine kinase  38.14 
 
 
1013 aa  65.9  0.0000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3228  Two-component protein Kinase  36.84 
 
 
595 aa  65.1  0.0000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2996  two component LuxR family transcriptional regulator  36.84 
 
 
595 aa  65.1  0.0000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.896317  n/a   
 
 
-
 
NC_002947  PP_2942  response regulator  33.64 
 
 
456 aa  65.1  0.0000000003  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_007517  Gmet_3472  response regulator receiver domain-containing protein  34.58 
 
 
187 aa  65.1  0.0000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  35.71 
 
 
438 aa  64.7  0.0000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B2026  Two-component protein Kinase  36.84 
 
 
595 aa  64.7  0.0000000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  36.19 
 
 
270 aa  64.7  0.0000000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_4402  response regulator receiver protein  32.23 
 
 
280 aa  64.7  0.0000000004  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1529  response regulator receiver  32.14 
 
 
151 aa  64.3  0.0000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.542106  normal 
 
 
-
 
NC_010172  Mext_2842  PAS sensor protein  36 
 
 
622 aa  64.3  0.0000000006  Methylobacterium extorquens PA1  Bacteria  normal  0.174863  normal 
 
 
-
 
NC_011757  Mchl_3068  PAS/PAC sensor hybrid histidine kinase  36 
 
 
622 aa  64.3  0.0000000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.231547  normal 
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  30.89 
 
 
472 aa  63.9  0.0000000006  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_007298  Daro_0972  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  36.28 
 
 
994 aa  63.9  0.0000000007  Dechloromonas aromatica RCB  Bacteria  normal  0.172335  normal 
 
 
-
 
NC_010511  M446_6442  multi-sensor hybrid histidine kinase  34.75 
 
 
688 aa  63.5  0.0000000009  Methylobacterium sp. 4-46  Bacteria  normal  0.381857  normal 
 
 
-
 
NC_009483  Gura_0224  response regulator receiver sensor signal transduction histidine kinase  35.34 
 
 
379 aa  63.5  0.0000000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7165  response regulator receiver protein  35.34 
 
 
143 aa  63.5  0.000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.272897  n/a   
 
 
-
 
NC_009523  RoseRS_0520  multi-sensor signal transduction histidine kinase  36.79 
 
 
556 aa  63.2  0.000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.936608  normal  0.731504 
 
 
-
 
NC_007908  Rfer_1980  response regulator receiver modulated metal dependent phosphohydrolase  33.02 
 
 
449 aa  63.2  0.000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.247955  n/a   
 
 
-
 
NC_007969  Pcryo_1766  response regulator receiver domain-containing protein  31.67 
 
 
311 aa  63.5  0.000000001  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.143421 
 
 
-
 
NC_007973  Rmet_2950  response regulator receiver sensor signal transduction histidine kinase  30.97 
 
 
378 aa  62.8  0.000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.37884  normal 
 
 
-
 
NC_009523  RoseRS_4039  multi-sensor hybrid histidine kinase  35.34 
 
 
1039 aa  63.2  0.000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1981  two-component response regulator, sigma-54 related  35.11 
 
 
448 aa  63.5  0.000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.472322  normal  0.614669 
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  36.79 
 
 
470 aa  62.8  0.000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1895  response regulator receiver protein  33.63 
 
 
185 aa  62.8  0.000000002  Geobacter lovleyi SZ  Bacteria  normal  0.706146  n/a   
 
 
-
 
NC_008312  Tery_3395  response regulator receiver protein  31.97 
 
 
132 aa  62.4  0.000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.306635  normal  0.186564 
 
 
-
 
NC_013132  Cpin_1404  response regulator receiver protein  29.06 
 
 
154 aa  62.8  0.000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  36.79 
 
 
472 aa  62.4  0.000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
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