| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2012 |
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| Symbol | hoxA |
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| ID | 5152962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2077171 |
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| End bp | 2078628 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640556953 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001238109 |
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| Protein GI | 148253524 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATCC AGGGAACGAT ATTGGTTGTG GACGACGAGG TCCGGTCGCA GGAGGCGCTG
CGGCGCGTCC TGAACCAGGA CTTCGAGGTC CTGTGCGCCG GCAATACGAC CGATGCCGAG
AAGCTGCTCG AGGGCGAGAT CGTCCATGCC GTGATCTGCG ATCAGCGCAT GCCGCAGGAA
TCCGGTGTCA GCTTCCTGAA GCGCGTGCGC GAGCTGTGGC CGGATCCGGT GCGGATGATC
ATCTCCGGCT ATTCGGATTC CGAGGACATC ATCGCCGGGC TCAACGAAGC CGGCATCTAT
CAGTACATCA CCAAGCCCTG GCAGCCTGAC CGGCTGATCG AGATCGTGCG CGAGGCCGTT
CAGCTCTACC GGCTGCAGAA GGAGACCGAG ACTGCCGGTG TCGACGTCAA GGCGACGCCG
GCGCATATCA AGCAGGTCGT GTCCGTCAAG CGCGGCGCGG CCAAGAAGCT GTACGATTTC
GACCGTATCG TGCACTCGGC CGCAAGCCCG ATGCGCAACG TGATCGAGCT CGGCCGCCGC
GCCGCCGACT ATGACATCTC GGTGCTGATC ACCGGCGAGT CCGGCACTGG CAAGGAACTG
CTGGCGCGTG CGATCCACTA TGGCTCGGCG CGCGCGACCA AGGCGTTCGT GGTCGAGAAT
TGCGGCGCGC TGCCGGATGA GCTGCTCGAG AGCGAGCTGT TCGGCTGCAA GAAAGGCGCG
TTCACCGGCG CCTATCAGGA TCGCATCGGC CTGTTCGAGG TCGCCGATGG CGGCACCATT
TTTCTCGACG AGATCGGCGA GACATCGCCG GCGTTCCAGG TGAAGCTCTT GCGCGTGCTG
CAGGAGAGCG AGATCCGGCC GCTCGGAGCG CAGCGTGTCC GCAAGGTGGA TGTCCGCGTG
GTCGCCGCGA CCAACCGGGA TCTCGAAGCC GAGGTCGAGG CCGGGCGCTT CCGTCGCGAC
CTGTATTACC GGCTTGCCGC GTTCCCGGTG CACATGCCGG CGCTGCGGGA CCGCCCGATG
GACATTCCGT TGATTGCCGA AGGAGTGCTG TCGGCGGTGA AGACCTCGTT CAACCGGCCG
CATCTGCGCT TCGCGCCGCC CGCGCTGGAG GAGTTCTGCC GTTACCATTG GCCCGGCAAT
GTGCGCGAGC TGCAGAACGA GATCCAGCGC ATGGCGGTGC TTGCCGATGC CGACGAGCTG
CGCTGCCCGC CTTTCGCCGG GCGGCGCAAC GGCCGCCGCG CCGCGCCTGC GGCGACCCAT
GGCAAGCTGA ACGGGACGGC AAGCCTGAAG GACCGGGTGG AAGATCTCGA AAAGACCATC
ATCGTGTCCT GCCTGGAGAA ATATGATGGT AACATCAGCC GGGTCGCGAG CGAGCTCGGC
CTCTCGCGGG TCGGCCTGCG CAACAAATTG TCGAGATACG ATCTGAAGAA AAATGGCAAA
GGCCACGCAC TCTCCTGA
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| Protein sequence | MGIQGTILVV DDEVRSQEAL RRVLNQDFEV LCAGNTTDAE KLLEGEIVHA VICDQRMPQE
SGVSFLKRVR ELWPDPVRMI ISGYSDSEDI IAGLNEAGIY QYITKPWQPD RLIEIVREAV
QLYRLQKETE TAGVDVKATP AHIKQVVSVK RGAAKKLYDF DRIVHSAASP MRNVIELGRR
AADYDISVLI TGESGTGKEL LARAIHYGSA RATKAFVVEN CGALPDELLE SELFGCKKGA
FTGAYQDRIG LFEVADGGTI FLDEIGETSP AFQVKLLRVL QESEIRPLGA QRVRKVDVRV
VAATNRDLEA EVEAGRFRRD LYYRLAAFPV HMPALRDRPM DIPLIAEGVL SAVKTSFNRP
HLRFAPPALE EFCRYHWPGN VRELQNEIQR MAVLADADEL RCPPFAGRRN GRRAAPAATH
GKLNGTASLK DRVEDLEKTI IVSCLEKYDG NISRVASELG LSRVGLRNKL SRYDLKKNGK
GHALS
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