| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1171 |
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| Symbol | |
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| ID | 6408827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1239291 |
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| End bp | 1240739 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711069 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_001990186 |
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| Protein GI | 192289581 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGAC AGGCGACAGT GCTGGTGGTC GACGACGAGA TCCGGTCGCT CGAATCGCTG
AAGCGGGTGC TGTGCGACGA GTTCGAAGTG ATCTGCGCGC GCGACGCCGG TGAGGCGCGG
CGAGTGCTGG AGAGCGAGAT CGTTCACGCC ATCCTGTGCG ACCAGCGGAT GCAGTACGAA
ACCGGCGTCG ACTTCCTCAA GGATGTGCGC AAGACCTGGC CTGACCCGGT GCGGATGATC
ATCTCCGGTT ATTCCGACAG CGAGGACATC ATCGCCGGCA TCAACGAAGC CGGAATCTAT
CAGTACATCG CCAAGCCGTG GCATCCGGAC CGGCTGCTCG ACATCGTCCG CGGCGCGGTG
CAGCTGTTCA TGCTGCAGAA GGAAACCGAG ACCGCCGGCA TCGACATCAA GCTGACGCCG
GAGCGGGCGC AGCGTGTCGT TACCGAAAAG CGCGGAGCCG CCCGCAAGCT GTACGAGTTC
GACCGCATCG TGCACGCGCC GGATAGTCCG TTGAGCGAAG TCATCGAACT TGGCAAGCGC
GCTGCCGAGT TCGACATCTC GGTGCTGATC ACCGGCGAGA GCGGCACCGG CAAGGAGCTG
CTGGCGCGGG CGATCCATTA CGGCTCGGCT CGATCCGGCA AGGCGTTCGT GGTCGAGAAC
TGCGGCGCGC TGCCGGATGA GCTACTGGAA AGTGAACTGT TCGGCTGCAA GAAAGGCGCG
TTCACCGGCG CCTATCAGGA CCGCATCGGT CTTTTTGAAG TGGCCGATGG CGGCACGATC
TTCCTCGACG AGATCGGCGA GACCTCGCCG GCATTTCAGG TGAAGCTGCT GCGCGTGCTG
CAGGAGAGTG AGATCCGTCC GCTCGGCGCG CAGCGGGTCC GCAAGGTCGA CGTCCGAGTC
GTCGCGGCGA CCAACCGCGA TTTGGAAGCC GAGGTGCGGG CCGGTCGATT CCGGCGTGAT
CTGTACTACC GGCTCGCGGC GTTTCCGCTG CATATGCCGG CGCTGCGCGA GCGGCCGATG
GATGTTCCAT TGATCGCCGC CAAGGTGCTG GCCGACGTCG CCAAGTCCTA CGGTCGCAAT
GTTGCAGGCT TCGCGCCGGG AGCGCTCAAC CGGATGCGGC ACTACGACTG GCCCGGCAAC
GTGCGCGAAC TGCAGAACGA GATCCAGCGC ATGGTGGTGC TGGCAACCGA GGACCGGCTG
CAGGAAGGCG ATCTGTCGCC GCGGGTGCGG CAGGGCGGTG AGCCGATCCA GCTCAAGCCG
GTGCGCAACG GCTGTGCGAC GCTGAAGACC AACATCGAAG CGCTGGAGCG GCACATGATC
TCCGAGGCGC TCGATCGTCA TGGCGGCAAT ATCAGCCGCG TCGCCGGCGA GCTCGGTCTG
TCGCGCGTCG GGCTGCGCAA CAAGCTCGGT CGTTACGATT TGCGCAAGGG CCTCGCCGAT
GAGGTCTGA
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| Protein sequence | MSGQATVLVV DDEIRSLESL KRVLCDEFEV ICARDAGEAR RVLESEIVHA ILCDQRMQYE
TGVDFLKDVR KTWPDPVRMI ISGYSDSEDI IAGINEAGIY QYIAKPWHPD RLLDIVRGAV
QLFMLQKETE TAGIDIKLTP ERAQRVVTEK RGAARKLYEF DRIVHAPDSP LSEVIELGKR
AAEFDISVLI TGESGTGKEL LARAIHYGSA RSGKAFVVEN CGALPDELLE SELFGCKKGA
FTGAYQDRIG LFEVADGGTI FLDEIGETSP AFQVKLLRVL QESEIRPLGA QRVRKVDVRV
VAATNRDLEA EVRAGRFRRD LYYRLAAFPL HMPALRERPM DVPLIAAKVL ADVAKSYGRN
VAGFAPGALN RMRHYDWPGN VRELQNEIQR MVVLATEDRL QEGDLSPRVR QGGEPIQLKP
VRNGCATLKT NIEALERHMI SEALDRHGGN ISRVAGELGL SRVGLRNKLG RYDLRKGLAD
EV
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