Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0520 |
Symbol | |
ID | 5207457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 653276 |
End bp | 654946 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594140 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001274894 |
Protein GI | 148654689 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.936608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.731504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGG CAATCGGTAC TGCGGTTTCC AAAACGCCAG CCGGCGCCTC ACCGCCACGT TTGCTGATCG TCGATGATGA ACAGCATATG TGCGATGTAT GCTCGCGCAC CCTGCAACGC GCCGGCTACG ACGTGCTTGC CACCAACGAT CCGCTTGTCG CCATTGAGGC GCTCAACAAT GGGCAGCACT TCGATCTGCT GCTGACCGAT ATCAAAATGC CGGCGATGAG TGGTCTCGAT CTGGCGCGAA TCGCGCGCGA AAAAGACCCG GAGATTGCCA TTATCATCAT GACCGGGTAT GCGTCGCTTG AAAATCTCCA CCAATCGGTG CGGCGCGGCG TGGCGGATTT TCTCGCAAAA CCGTTCGAAC TCGAGCAACT GCGCCTGGCG GTCGATCAGG CATTGCACAA ACGCGCGATG CAGCAGGACA ACCTGCGATT GCGGACGCTC GAACAACTGC TCGCGGTCAG CGAAGCGCTC AGCGCCACGC TAGAACTGTC GGAACTGGTC CATACCGTCC TCGATGCCAT GATCGAACGG AGCGGGTTTC AGACCGGGTT CCTGCTGCTG GGGGATGAAC CTGCAATGTT GCATCTTGCA GCAACAACAC CAGAGACGGC GCACCTGACC GACGAGGGAC GCGCGCTGGC TGAGCGCGCA TTCACCCTCC AGCAAACACG CTATGAAGAG ACTGCGTGCT ACGGAACACA GCCTGATCAG ACACTGCACG CAGCGCTCGC CGTGCCGCTG CGCGCTCAAG GGCGAGTCAA CGGCGTGGTT GTCCTGTGCA ACCAGCACTC CACCACCCTG CGACCGGGCG TCCAACAGGG GTTAATGTTG CTCGCCAACC AGGCTGGCGC CGCGTTGCGC AACGCAACCC TCTACCGTCA ACTCGATGAA GCGTATCAGC GCCGACAGGA ACTCGATCAC CTCAAAAGCG AGTTCATCGC CATCGCCTCG CACGAACTGC GCACTCCACT CTCGATTGTA CTTGGATATA CTATGATGGT CCGTGATCAG GTCGAGGGAA GTCAGCGCGA CTACCTTCAG CGCGTAATGG AGAGCGCCCA ACGTATCAAA GCGATCGTCG ATGATATGGT CAATCTGCAC TACATCGATA CTGGTGAGTC ACAACCGCAA CTCGCGCTGG TCGATCTGGG CGAGACGATC TACCAGACGG TGCAGAATCT GCGCAGTGCG GCGGAACTCG CGGGGCAAAC GATCACGGTC AACCTGCCCG ATGCGCTCCC GCCATTCCTG ACTGATCGCG AAAAGGTGAT GCTGGTGCTC AATCATCTGT TGTCCAATGC GATCAAGTTT ACGCCGCAGC ACGGACGGAT CACGATTACG GTGAGCATAC GGCAGTATCA CGAACTGGAG TCGCTGCGCG AAGTATCGGT CATCACGCCT TCGGCGTCGC TTCGCGCATT ACCCTGGGTT GTGACCGATG TCAGGGACAC CGGGATCGGC ATCCCGATGC ACGAACGAAC GCGGATCTTC GAACGTTTTT ATCAGGTCGG CGACTCGCTT ACGCGCGAGC GTGGCGGCGT CGGGCTTGGA TTGGCGCTGG TGCGCGAGTT GATAGCCTCA CTGGGCGGGG CGGTGTGGGT TGTCAGTCGA GAGGGTGAAG GCAGCACCTT CTCGTTTGCG CTCCCCCTCC GCCGGACTTA G
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Protein sequence | MSQAIGTAVS KTPAGASPPR LLIVDDEQHM CDVCSRTLQR AGYDVLATND PLVAIEALNN GQHFDLLLTD IKMPAMSGLD LARIAREKDP EIAIIIMTGY ASLENLHQSV RRGVADFLAK PFELEQLRLA VDQALHKRAM QQDNLRLRTL EQLLAVSEAL SATLELSELV HTVLDAMIER SGFQTGFLLL GDEPAMLHLA ATTPETAHLT DEGRALAERA FTLQQTRYEE TACYGTQPDQ TLHAALAVPL RAQGRVNGVV VLCNQHSTTL RPGVQQGLML LANQAGAALR NATLYRQLDE AYQRRQELDH LKSEFIAIAS HELRTPLSIV LGYTMMVRDQ VEGSQRDYLQ RVMESAQRIK AIVDDMVNLH YIDTGESQPQ LALVDLGETI YQTVQNLRSA AELAGQTITV NLPDALPPFL TDREKVMLVL NHLLSNAIKF TPQHGRITIT VSIRQYHELE SLREVSVITP SASLRALPWV VTDVRDTGIG IPMHERTRIF ERFYQVGDSL TRERGGVGLG LALVRELIAS LGGAVWVVSR EGEGSTFSFA LPLRRT
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