Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4039 |
Symbol | |
ID | 5211022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5058869 |
End bp | 5061988 |
Gene Length | 3120 bp |
Protein Length | 1039 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640597627 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001278333 |
Protein GI | 148658128 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCTGGT TGCTGCCGGT TTTTGTTTCG CTTCTCATTG TCGCAGCCCT GATCGAAGCC GCAGTTGCGC TGTACGCCTG GCGTCAGCGC ATGACTGCCG GGGCGATGCA ACTGGTGGCG CTGATGGCAG CGGCCATTAT CTGGACGCTG GCGTATGGTC TGGAACTGGT CAGCACGTCG CTGGCGATCA AAATGGTCTG GAACGGCATT GCGTATCTTG GCGTCGCATT TCTGCCCATT CTCTACCTGC GCTTCATTAT CGCCTACACT CAACGCGCAA CATGGCTCCT GCGCTGGCGT GGCGCACCCT GGTACATCAT TCCGATAGCC ACGATTGCGC TCAACTGGAC GAATAGCGCC CATGGTCTGT ACTATCAGCA GGTCACACTG GTGAACGAAG GACCGCTTGT GCTCCTCAGC GTTACGCCTG GTGCGTGGCT ATGGGTGTTT GCTCTGTATT GCTACATCTC GATAGCACTT GGCGCTGTTC TGTTCTGGCG TGCAGCCCGT GATACGTCGC CGTTGCAGGG CGGACGCTCC GTCATGGTTG CTATCAGCAC ATTCGCGCCA TGGATCGCCA ATCTGCTGCA ACTCTTCGAA CTCCATCCCT TCATACTGCT GGACATCACT CCGCTTGCTG TTGCATGTTC AGGGCTGGCG ATTATGTGGG GTATGTTTCG CTATCGGCTC TTTTCGCTGG CGCCGATTGC GCGTGAGCAT GTTGTCGAGA TGATGAGCGA TGCGGTCATC GTTGTCAATG CGCGCAACCG GATCATCGAT CTGAACCCGA CGGCGCAGCA CCTCTTCGCT CCTGATGGCA GTTCACTCTT CGGTCAACGG ATCGAGACGC TGCTGGCGCC GTGGCCCGTG CTGAAGCAGG CGTGCCGCGA GCCGGTCGAA CAGGTGTTAG AGGTCGAATA TGACCGATCA ACCCGGCAGC TCTTCGAGGT CAAAATCAGC CCGCTTGTCG GTGACGGCGG CAGGATCAAC GGGCGGCTCC TGATCTGGCG CAATATCACG CAGCGCAAGC GCAATCAGGC GTTGCTCCGC GATCGGTTGC GGTTCATTCA GTTGATCCAG CACGCCGCCA ACGATTTCGT GCGCTGCGAA GTGACGCAGA TCGACGAACA GATCGTCGCC ATGCTGCAGA AAGTCGCTGT CTTCACCGGC GTCGAGCGCA GTTATATCGC CCTGATTACG CCAGAGGGCG ACCGCGCGAC CATTGCCTAT GAGTGGCTGC ATCCGGCGGC GACATACAGC GATGAACGGT TGCAACCGGT TGTCCTGTCG AAGTTCGCCC GCTGGGTCGA ACAGTTGCGG CGGGGCGAAG TTGTTGCGCT TCAGTATGCC GATATTCCCG AAACACCTGA GTATGAGGTG CTGCGACAGG CACTCCATAC ACTCCAACTC AAAACGATGG CGGCTATTCC GCTGTTTGTT GGTGCAACGT TCATCGGGTG GATCGGCTTT GACACAATGA GCTACGCATA TGAGCTCTCT GAAGCCGCAA TAGAGGCGTT TCAGTTGACC GGCCAGTTAA TCGCCAGTGC CATTCATCGC CAGCGCACCG AAATGGCGCT TCGCCAGCGT GAGCAGTACT TCCGTTCGCT ATTCGACAAT ATGCTGGAAG GGGTGGCGCT GCACCGGCTG ATCTACGATG AGCGCGGCAG GGCCATCAAT TATGAGATCA TCGATGTCAA CCATCAGTAC GAGCGCATCC TCAATCTGCG CCGCGATGAT GTCGTCCATC GCCTTGCAAC CGACGTCTAC GGCACATCCG AACCCCCCTA CCTGGCAGAG TTCAGCGCTG TGGCGGCGAC CGGTCAACCG GCGCATTTCG AGGTTTATTT TGCGCCAATG CAGAAACACT TCTTCATCTC AGTCTCACCG CTTGGACCAG ACCAGTTCGC AACGATCTTC TTCGACATGA CCGCGCGCAA ACAGGAAGAA GCCGAACGAG AGCAATTGCA GATGCAGTTG ATGCAGGCGC AACGTCTGGA GTCCGTGGGG CGGCTGGCGG GCGGCATCGC CCACGATTTC AACAATATCC TGACGGTCAT CAGCGGTAGC GCCGACCTGG CGCTGGCAAT GATGCCTCCC GACTCTCCGG CATATGCAGA TGTGCAGACG ATCCAGCAGG GGGCCAGACG TGCTGCGAAT CTGGTGCGCC AGTTGCTCGC CTTTGCCCGA CGTCAGCCCG GTCATCCCCA GACGGTTGAT GCAAACGAGG TGATTGAAGG GATGCTCCCG CTCGTGCGGC GCTTGATCGG CGAGGATATT CGCTTCGTGT GGGCCCCGGC GCCGTATCCC TGCGTAATCA TTATCGATCC ACATCAATTC GAGCAGGTGG TGATGAACCT GATTGTCAAT GCGCGCGATG CCATGCCGGA TGGCGGTGCA CTGACGATCA CCACATCCGT CACCGAGATG GCTGCCGGGG ATGAAGATTC GGCAGAGACG CCGTTTGTTT GTATTACGGT TGAAGATACC GGCGTCGGCA TGGATGCGGA GGTCATGGCG CATATTTTTG AGCCGTATTT CACAACGAAA GCCCCCGGTC AGGGTACCGG TCTTGGTCTG GCGACCTGTC TGGGCATTGT CCAGCAGTAT GCCGGCTTCA TCCGCGTCGA GAGCGAACCA GGGGAGGGTA GTCGGTTCGA GGTCTTTCTC CCCTATGCTC CTGGTCTGAC GACACAGGTG GACGAGAGCC AGAGCGATGC CCAACCGGAA GGAGGACTGG AAACAATCCT GGTTGTCGAA GATGAACCGA CGGTACGGCA ACTGGCGGTG CGGATACTGC GTGATTATGG CTATACCGTG TTCGAAGCGG GCAACGGGCA CGAGGCGCAG CAGGTTGTTA CCACGCTGGC TGGCGCACCT GTTCATTTGC TGTTGACCGA TCTGGTCATG CCCGGCATGA GCGGCGTTGA ACTGGCAACG TGGTTTCAAA CGCGCTATCC TGGCGCGAGT ATTTTGTTCA TGTCCGGGTA TGCGCGTCAA CTGCCGGATG GCGTCGACAA TCCAACCATC GCCTTCTTGC AGAAGCCGTT CAGCCGCCAT ACCCTGTTGA CCCAGGTGCG CCGCCTGCTC GACGCGGTGG CGACACATGT TTCCGCCTGA
|
Protein sequence | MVWLLPVFVS LLIVAALIEA AVALYAWRQR MTAGAMQLVA LMAAAIIWTL AYGLELVSTS LAIKMVWNGI AYLGVAFLPI LYLRFIIAYT QRATWLLRWR GAPWYIIPIA TIALNWTNSA HGLYYQQVTL VNEGPLVLLS VTPGAWLWVF ALYCYISIAL GAVLFWRAAR DTSPLQGGRS VMVAISTFAP WIANLLQLFE LHPFILLDIT PLAVACSGLA IMWGMFRYRL FSLAPIAREH VVEMMSDAVI VVNARNRIID LNPTAQHLFA PDGSSLFGQR IETLLAPWPV LKQACREPVE QVLEVEYDRS TRQLFEVKIS PLVGDGGRIN GRLLIWRNIT QRKRNQALLR DRLRFIQLIQ HAANDFVRCE VTQIDEQIVA MLQKVAVFTG VERSYIALIT PEGDRATIAY EWLHPAATYS DERLQPVVLS KFARWVEQLR RGEVVALQYA DIPETPEYEV LRQALHTLQL KTMAAIPLFV GATFIGWIGF DTMSYAYELS EAAIEAFQLT GQLIASAIHR QRTEMALRQR EQYFRSLFDN MLEGVALHRL IYDERGRAIN YEIIDVNHQY ERILNLRRDD VVHRLATDVY GTSEPPYLAE FSAVAATGQP AHFEVYFAPM QKHFFISVSP LGPDQFATIF FDMTARKQEE AEREQLQMQL MQAQRLESVG RLAGGIAHDF NNILTVISGS ADLALAMMPP DSPAYADVQT IQQGARRAAN LVRQLLAFAR RQPGHPQTVD ANEVIEGMLP LVRRLIGEDI RFVWAPAPYP CVIIIDPHQF EQVVMNLIVN ARDAMPDGGA LTITTSVTEM AAGDEDSAET PFVCITVEDT GVGMDAEVMA HIFEPYFTTK APGQGTGLGL ATCLGIVQQY AGFIRVESEP GEGSRFEVFL PYAPGLTTQV DESQSDAQPE GGLETILVVE DEPTVRQLAV RILRDYGYTV FEAGNGHEAQ QVVTTLAGAP VHLLLTDLVM PGMSGVELAT WFQTRYPGAS ILFMSGYARQ LPDGVDNPTI AFLQKPFSRH TLLTQVRRLL DAVATHVSA
|
| |