Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2496 |
Symbol | |
ID | 4484166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3183579 |
End bp | 3185066 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639723244 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_866402 |
Protein GI | 117925785 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0534594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.148721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAAC AGCGACCGAC CATTCTGGTG GTGGATGATG AGCTGCGTTC TCTGGAGTCG CTGGCGCGTA TTCTGGAAGA AGAATTTGAT GTTAAAACCG CCCAAACCGT TGCTCAAGCC GACGCCATTT TGCAGACCGA GTGGGTGCAG GTGGTGCTGT GTGATCAACG CATGCCGGAG ATCACGGGGG TGGCCTATCT CAAAAAATTG AGGGACCTCT ATCCCGACGT CATTCGTATG ATTATATCCG GTTATAGTGA TCCAGAGGAT ATCATCCACG CCGTTAACGA AGCGGGGATC TATCACTATA TTTCCAAGCC GTGGCATCCC GACTCACTGC TGCTTACGTT GAGCAATGCC ACCCGTCTGT ATGCCCTGCA ACGGCAAAAC CAAGCGTTGT CGGTAGAGGT CAAAATGACC CCGCAGCGGT TGGATGAGAG CATGCGCCGT AAACGGGAAG GGTTGCGCCA GCGGTTTGCC CGCAATGATG GCATTGTGCG CAGCCGGGGC AGTTGTATGG ATGCAGTGTG TCAGCGGCTA AAAAAGGTTT CACCTTATGA TGTTTCGGTC TTATTGACCG GCGATTCTGG TACCGGTAAG GAGCTGGCGG CCAAGGCGTT GCACTACAGC AGTTTGCGCT GGGATAAGGC GTTTGTGGTG GAAAACTGTG GGGCGTTGCC GGATCAGTTG TTGGAAAGCG AGCTGTTTGG CTACAAAAAG GGGGCCTTTA CTGGGGCGGT GGAGGATCGT ATAGGGCTCT TTGAGCGGGC CGACGGGGGT ACTTTGTTTT TGGATGAGAT TGGGGAGATC TCACCGGCCT TTCAGGTTAA GTTGTTGCGG GTGTTGCAGG AGGGGGAGAT TCGTCCCCTG GGCAGCAGCC GCACCCGCAA GGTGGATGTG CGGTTGATTG CGGCCACCAA TCGGGATCTT GAGACAGAGA TGCTGGCGGG GCGTTTTCGG CCTGATCTCT ACTATCGGTT GGCGGCGGTG ACCATCTATC TGCCCGCTTT AAAGGCGCGT CCCGAGGATA TTCCGGCCTT GGCCCATGCG TTGTTGGAGC AGGCGATGGA GAGCATGGGC AAACAGGTGC GGGGCTTTAC TGAGGAGTGC ATGCACTGTT TACAGGCTTA CCCCTGGCCC GGCAATGTGC GGGAGTTGCA AAATGAGATC CAGCATATGC TGGTGATGGC GGAGGGGGAT CTGCTGGGGG CGGATCTGCT CTCTGCGCGG GTGTTGCAGG GGCTGCCGTG GCAGGAGCAG GCGCAAGGGG AGGAGAGATG GCCGTTGTTA GGGCCGTTAG GGGGCAGTTT AAAAGAGCGG GTCGAGCTGT TGGAGGCGCG TATTGTGCGG GAGACGCTGA TCCGGCACCG TTGGAATAAG AGCCGGGCGG CCAAAGAGTT GGGGCTCTCC CGGGTGGGCT TGCGGAGTAA ACTGGAGCGC TATGGTCTGG AGCAGCGCAG CAGCCAAGAT GCGCAAGCCC AAGCGTAG
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Protein sequence | MVEQRPTILV VDDELRSLES LARILEEEFD VKTAQTVAQA DAILQTEWVQ VVLCDQRMPE ITGVAYLKKL RDLYPDVIRM IISGYSDPED IIHAVNEAGI YHYISKPWHP DSLLLTLSNA TRLYALQRQN QALSVEVKMT PQRLDESMRR KREGLRQRFA RNDGIVRSRG SCMDAVCQRL KKVSPYDVSV LLTGDSGTGK ELAAKALHYS SLRWDKAFVV ENCGALPDQL LESELFGYKK GAFTGAVEDR IGLFERADGG TLFLDEIGEI SPAFQVKLLR VLQEGEIRPL GSSRTRKVDV RLIAATNRDL ETEMLAGRFR PDLYYRLAAV TIYLPALKAR PEDIPALAHA LLEQAMESMG KQVRGFTEEC MHCLQAYPWP GNVRELQNEI QHMLVMAEGD LLGADLLSAR VLQGLPWQEQ AQGEERWPLL GPLGGSLKER VELLEARIVR ETLIRHRWNK SRAAKELGLS RVGLRSKLER YGLEQRSSQD AQAQA
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