| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3263 |
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| Symbol | |
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| ID | 5696126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3919134 |
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| End bp | 3921053 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265883 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001531143 |
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| Protein GI | 158523273 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTCT ACCGGAAAGA GGACGAAAAG CTGAGAATGT TCATGGAACA CACCAGCTCC
CTGGTCGCCA TTCTTGATAA AAATGGAAAC TACGAGTATG TCAGTCCCTC CCATGAACGG
CTGCTGGGCT ATTCACCGAA AGCACTTTTG GGCACCTCGG GTTTCGGCAT TGTCTATCCC
GAGGATGGCG AATGGATGGC AAAGATACTG GCCGACGGCC TGTCCGGCAG CATGGACCGG
GTGTACGGCC TGGAGTACCG GGCACTGGAT AAAGAGGGCC GGGTGCATTA TCTGAAAGGA
AATTTTGACT CCATTCGGGA CAACCGGGCC AACCTGCAAA ACATCGTCTT TGTGGGTGAT
GATGTTACTG ACCTTCGGGA GTCGGCAGCG GAACTGGACC GGGAAAAAGA AAAGTTCAGG
GGCCTGATGG AAGGCTCTCC GCTGGGTATC TTTGTGCGTG AAAAAGACGA CGCGATCTCT
TATGTCAACG CAACGTTTGT CGCGCTTTTC GGGTATACGC AAAAAGAGAT CGCCACCGGC
AGCGACTGGT TTCAACTGGT CTATCCCAGC GTGGAGCACC GGCAGCAGAT TCTCGAGACA
TGGAAGGCGG ACCTGGAAAC CGTGAGCCCC GGCGGCAGTT CGCCCACCCG CAAGCATGTG
GTGACGTGCA GAGACGGCAC GGAAAAAACC GTGCTGCTCT TTTTTGTGGT GTTGCAAACC
GGGGAGCAGC TGGTGGTCTG CCAGGACATC ACCCGGCAGG AGTCCCTGGA AGCCCAGTTC
CTGCATGCCC AGAAAATGGA GAGCATCGGC CGCCTGGCCA GCGGCATCGC CCACGACTTT
AACAACCTGC TGACCACCAT CATCGGCAAC GCTGATTTTG CCCTGATGGA CTTAAAGCCG
GAAGATGACC TCCATGACGT GGTCCGGGAG ATCAAGGATG CCGCGGACAG GGCCGCCAAC
CTGACCCGGC AGCTGCTGGC CTTCAGCCGC AGGCAGAGTT GCCACCCGGA GGAGCTGAGC
CTGAACACCA AGCTTCAGGA TACGGAAAAG ATGATTCGTC GCCTGATCGG CGAAAATATT
GAGCTGGAGC TGGCCCTGGC TTCGGACGCG GCCCGGGTGG AGATGGATCC CGGCCAGCTG
GACCAGGTGA TCATGAACCT GGTGGTCAAC GCCCGGGATG CCATGCCCGA CGGGGGAAAG
CTGACGATTC AGACCGCCAG GGTGGATCTG AGCGGGGATG ACCCGGTCAG CCCGGTGGAG
CTCATTCCAG GGGCCTATGT GCTGTTGAGC ATGACCGATA CGGGCATGGG AATTCCCCGG
GAAGTTCAGG ACCAGGTCTT TGAACCGTTT TTTACCACAA AGGAGAAGGG CAAGGGCACC
GGCCTGGGCC TGTCAACGGT TTACGGCATT ATCAAGCAGA ACAATGGCAA CACCCTGATC
TACAGCGAGC CCGGCAAAGG CACCACCGTG AAGATTTTTC TTCCGGTGCA CGAGCGGCCT
TCCGACAACA CCGGAAAGCC CGCGGACAGG GGCACGCGCC TTCACGGTAC CGAGGCCATC
CTGCTGACCG AGGACGAGGA AAGGGTCAGA AAGATTGTGG CGCGCATGCT GATGCGGTAT
GGCTACACCG TGATGGAGGC CGGCGACGGC CGGGAGGCAC AGCGCCTTTT TCGGGCCGCT
CACCAGCCCG TGAAACTGCT GCTCACCGAC ATGATCATGC CGGGCATGAA CGGCCTGGAG
CTGGCTGTTT CCCTGCGCGG CGCCCAGCCG GATCTCAAGG TGCTCTGCAT GTCCGGTTAT
ACGGACACCG CTCTTTTCGA AGGGGTGAAA AACGAGGGGT TTGAGTTCAT CCACAAGCCG
TTTACGCCCA CGACCCTGGC CGCCAAGGTC CGGGAACTGC TGGATGAAGA ACAGGGGTAA
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| Protein sequence | MSFYRKEDEK LRMFMEHTSS LVAILDKNGN YEYVSPSHER LLGYSPKALL GTSGFGIVYP
EDGEWMAKIL ADGLSGSMDR VYGLEYRALD KEGRVHYLKG NFDSIRDNRA NLQNIVFVGD
DVTDLRESAA ELDREKEKFR GLMEGSPLGI FVREKDDAIS YVNATFVALF GYTQKEIATG
SDWFQLVYPS VEHRQQILET WKADLETVSP GGSSPTRKHV VTCRDGTEKT VLLFFVVLQT
GEQLVVCQDI TRQESLEAQF LHAQKMESIG RLASGIAHDF NNLLTTIIGN ADFALMDLKP
EDDLHDVVRE IKDAADRAAN LTRQLLAFSR RQSCHPEELS LNTKLQDTEK MIRRLIGENI
ELELALASDA ARVEMDPGQL DQVIMNLVVN ARDAMPDGGK LTIQTARVDL SGDDPVSPVE
LIPGAYVLLS MTDTGMGIPR EVQDQVFEPF FTTKEKGKGT GLGLSTVYGI IKQNNGNTLI
YSEPGKGTTV KIFLPVHERP SDNTGKPADR GTRLHGTEAI LLTEDEERVR KIVARMLMRY
GYTVMEAGDG REAQRLFRAA HQPVKLLLTD MIMPGMNGLE LAVSLRGAQP DLKVLCMSGY
TDTALFEGVK NEGFEFIHKP FTPTTLAAKV RELLDEEQG
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