| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1981 |
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| Symbol | atoC |
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| ID | 4186072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2311610 |
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| End bp | 2312956 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638071984 |
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| Product | two-component response regulator, sigma-54 related |
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| Protein accession | YP_678589 |
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| Protein GI | 110638380 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.472322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.614669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGAAAA ACATATTAAT TATAGATGAC GAAGAAAAAC TGAGAACCTT ACTCGCAAGG
ATTATCAGTC TGGAAGGTTT TGAAGTGCTT CAGGCAGGCG ACATTAAAAC AGCATTTAAG
AAATTAGAAC AAGCAGATAT TGATGTTGTA CTCTGCGACG TGAAACTGCC GGATGGTAAT
GGTATTGATA CATGCACAAA AATAAAAGAG CGATATCCAT TCACAGAAAT TATTCTATTA
ACGGCATATG GAAATATTCC CGATGGTGTC CAGTCCATTA AAAATGGCGC CTTTGATTAT
ATAACCAAAG GTGATGACAA CAATAAAATT ATTCCATTGC TCTATCGGGC AATGGATAAA
GTATCGCTGG CTAAACGTGT TCAGCAATTA GAAAAACAAC TTGGCGACAA ACACTCTTTT
GATAAAATTA CAGGCAAATC AAAATCCCTT TTGCACGCCA TTGACTTAGC AAAGAAGGTT
GCACAAACAG ATACAACCGT TCTATTGACC GGCGAAACAG GAACAGGAAA AGAAGTTTTT
GCTCAAGCCA TTCATCAGGA AAGCAATCGC AGTAAACAAA ACTTTGTAGC GATCAATTGT
TCCGCATTCA GCACAGATCT TCTGGAAAGT GAAATGTTTG GGCACAAAGC CGGTTCATTT
ACCGGAGCAA CAAAAGATCA AAAAGGGGTA TTTGAAGAGG CGAACAACGG CACCATTTTT
TTAGATGAAA TTGGAGAAAT GGCCATAAAC TTACAGGCAA AATTACTCCG TGTGATTGAG
ACCGGAGAGT TTTTAAAAGT TGGTGAAAGC AAAGTCACGA AAGTGAATGT TCGCATTATT
GCTGCTACAA ACAGAGATTT ACAAAAAGAG ATTGTAGCCG GACATTTCAG AGAAGATCTT
TTTTACCGCA TTTCTGTTTT TCAAATTCAA TTGCCGCCAC TGCGCGAACG CATGGTCGAT
ATTGAATTGC TGGCACATCA TTTTTTATCC TTGTTTTCAA GCAAGACCAA TAAAAAAATC
AAACGTATAT CAAACGAATG TATTGAAGCA CTTAAACAAC ACACCTGGAA TGGTAATATA
CGTGAACTCA AAAATGTTAT TGAACGTGCT GTGATCTTAT CAACCAGCGA TGAGATTCAA
CTAAATCAAT TACCGGTTGA ATTTCAATAT CATTCTATTG ATAAGAATGG AAAACAACTT
TCCGCTTTCG ACCTGGCAAG CGCAGAAAAA ATCCATATTC AAAAAGTGTT GAATTATACG
AATGGAAATA AAACAAAAGC ATCTGAATTA TTAAATATTG CGCTGACTAC CCTTTACCGA
AAATTAGAAG AATATAAAAT AAGCTGA
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| Protein sequence | MLKNILIIDD EEKLRTLLAR IISLEGFEVL QAGDIKTAFK KLEQADIDVV LCDVKLPDGN
GIDTCTKIKE RYPFTEIILL TAYGNIPDGV QSIKNGAFDY ITKGDDNNKI IPLLYRAMDK
VSLAKRVQQL EKQLGDKHSF DKITGKSKSL LHAIDLAKKV AQTDTTVLLT GETGTGKEVF
AQAIHQESNR SKQNFVAINC SAFSTDLLES EMFGHKAGSF TGATKDQKGV FEEANNGTIF
LDEIGEMAIN LQAKLLRVIE TGEFLKVGES KVTKVNVRII AATNRDLQKE IVAGHFREDL
FYRISVFQIQ LPPLRERMVD IELLAHHFLS LFSSKTNKKI KRISNECIEA LKQHTWNGNI
RELKNVIERA VILSTSDEIQ LNQLPVEFQY HSIDKNGKQL SAFDLASAEK IHIQKVLNYT
NGNKTKASEL LNIALTTLYR KLEEYKIS
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