| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2184 |
|---|
| Symbol | |
|---|
| ID | 5424742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2443307 |
|---|
| End bp | 2444800 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640881437 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001417085 |
|---|
| Protein GI | 154246127 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.682977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.229753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGCC GCCCCGCCAT CCTCGTGGTG GACGACGAGC CGCGCTCGGT GGAAGTCATT
GCCCGCGTGC TCGACGAGGA GTTCGACGTC TTCACCGCGC TCAACGCGGA CGAGGCCCGG
CGCATCCTCG AGAACGAGTG GATCCAGGTG ATCTTCTGCG ACCAGCGCAT GCCGCACACC
TCCGGCGTCG CGCTGCTCAC CGAGGTGCGC GAGCGCTGGC CGGATATCCT GCGCATCATC
GTCACCGGCT ATACCGAGCC GCAGGACATG ATCGGCGCCA TCAACGAGGC CGGCATCTAC
CAGTTCATCC CCAAGCCGTG GCACCCGGAC CAATTGCTGC TGGCCGCGCG CAACGCCGCC
CACCTGTTCC AGCTCCAGCG CGACCATGAG CGGCTGAACC TGGAAATGAA GCTCACCGCC
GTCACCGCCG AGGCGCGGCT CGGCGCCCAG CAGGCGCGGG TGAAGCAGAA TTTCCATTTC
GACACCCTCA TCCGCGCCCC TGGCAGCGCG CTGAGTGCGG TGTGCCTGCG GGCGGCGCAG
GTGGCGACTT TCGACGTGCC GGTGCTCGTC CATGGCGAGA CCGGCACCGG CAAGGAGCTG
CTCGCCCGCG CCATCCATTA TTCGAGCCTT CGCTCCGACC GGCCGTTCTT CGCCGTCAAT
TGCGGGGCGA TCCCGGACGA GCTTCTGGAA TCGGAGCTGT TCGGCCACAA GAAGGGGTCG
TTCACCGGCG CCCACGTCAC CCGCATCGGC CTGCTCGACC AGGCGGACGG CGGCACCATC
TTCCTCGACG AGATCGGTGA TGTGTCCCCC GCCTTCCAGG TGAAGCTGCT GCGCTTCCTG
CAGGAGGGCG AGATCCGCCC GGTGGGCTCC AACGAATCCA AGCGGGTCAA CGTGCGTGTG
CTCGCCGCCA CCCATCGCGA TCTCTATGGC GAGGTAGGGC GAGGCCGCTT CCGCGAGGAT
CTCTATTACC GCCTGTGCGC CATGGTGCTG ACCCTGCCGG CCCTGCGCGA ACGGCGCCCC
GACATCCCGG TGCTGGCCCA GAGCATCCTC GATGCGCTTT CCGCCCACCA CGGCAAGCGC
GTCAAGGGCT TCACCGAGGA AGCGCTCGCC TGCATGCAGG CCTATGACTG GCCCGGCAAC
GTGCGCGAGC TGCAGAACGA GATCACGCGC ATGCTGGTGC TGGCCGAGCG CGACACGCTC
TCCGCCGACC TGCTGTCGCC CCACGTGGTG CGCGCCGCCG CCGCCGAGAC ACGGGCGGTG
GAGACCCGCG CATCCGAGGC GGGGGCGTCT CAGGCCATCT CCCTGCCCGA CGGCGGGCCG
CTGAAGGAGC GGGTGGAGCG CATGGAAGCC ACCATCCTCA CCGAGACGCT GGTGCGCTGC
CGCTGGAACA AGAGCCGCGC GGCGGAGGAG CTTGGCCTCT CCCGCGTCGG ACTTCGGGCG
AAACTCGACC GCTACGGGAT CTCCCGCGGC GGGGCCTTTT CCAAGTCGCA TTGA
|
|---|
| Protein sequence | MNRRPAILVV DDEPRSVEVI ARVLDEEFDV FTALNADEAR RILENEWIQV IFCDQRMPHT
SGVALLTEVR ERWPDILRII VTGYTEPQDM IGAINEAGIY QFIPKPWHPD QLLLAARNAA
HLFQLQRDHE RLNLEMKLTA VTAEARLGAQ QARVKQNFHF DTLIRAPGSA LSAVCLRAAQ
VATFDVPVLV HGETGTGKEL LARAIHYSSL RSDRPFFAVN CGAIPDELLE SELFGHKKGS
FTGAHVTRIG LLDQADGGTI FLDEIGDVSP AFQVKLLRFL QEGEIRPVGS NESKRVNVRV
LAATHRDLYG EVGRGRFRED LYYRLCAMVL TLPALRERRP DIPVLAQSIL DALSAHHGKR
VKGFTEEALA CMQAYDWPGN VRELQNEITR MLVLAERDTL SADLLSPHVV RAAAAETRAV
ETRASEAGAS QAISLPDGGP LKERVERMEA TILTETLVRC RWNKSRAAEE LGLSRVGLRA
KLDRYGISRG GAFSKSH
|
|---|
| |