Gene Mext_2842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2842 
Symbol 
ID5834699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3188767 
End bp3190635 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content71% 
IMG OID641368643 
ProductPAS sensor protein 
Protein accessionYP_001640303 
Protein GI163852260 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.174863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG GCACGATTCT GGCCGTCGAT GACGAGCCGG ACATCCTGAT CGCTCTGGAG 
GACCTGTTCG AGGACGAGTA CCGGGTGCTC ACCTCGGCCA AGCCCGAAGA GGCGCTCGAC
ATCCTCCGCG CCGACCCGGA CATCGCGGTC GTCGTCTCCG ACCAGCGCAT GCCCGGCATG
ACCGGCGACG CGCTGCTGGC CGAGGCGCGC AGCTTCCACG AGGCGCAGGC CATCCTGCTC
ACCGGCTACG CCGACATCTC GGCGGTGATC GCGGCGCTCA ATCGCGGCGG CATCATCGGC
TATGTCGCCA AGCCCTGGGA CCCGACGCTG CTGCGCGCCA CGGTGCGCAA CGCCTATGAA
CGCCACCGCC TCGGCCGCGA TCTCGCCACC GAGCGGGCCC TGCTGCGCGG CCTCCTGGAT
CACGCCGAGG AGGCGATCTC CTTCAAGGAC GCGTCGGGCC GCTTCGTGCG CCTGAACGCG
CGCAAGGCGA GCCTCGTCGG CGGCACGGTC GAGGCCTGCC TCGGCCGCAC CGAGGTCGAG
ATCGCCGATA CGCCCCAGGC CCACGAGGCG GAGGCCGCCG ACCGCCGTGC GGTCGCGGCC
GGCGAAGCGG GCTCGACGGT GATCGCCCGC GGCGCGCTCG GCGCCGAGCG CTGGTCGCAC
GTCATCCGGG TGCCGATCCG CGGCGGCGCT GGCGAGGTCA CGCATCTCGC CACGATCGAG
CGGGACGTGA CCGAGCAGAA GAGCCTGGAG GCGCGGCTGC GCCAATCCGA CAAGATGCAG
GCGCTCGGCA CGCTGGCCGG CGGCATCGCC CACGACTTCA ATAACCTTCT CACCGCGATC
CTCGGCAGCC TCGAACTCGT CGGCCCCAAG ATCGCCGACC AGCCCCGGGT CAAGCGCCTC
GTGGACAACG CCACCGGCGC CGCGCAACGC GGCTCGGCGC TGACCAAGCG GCTCCTGAGC
TTCAGCCGCT CCAACGACGC CCATGCGCGG CCCGTGGACC CGAACGCGCT GATCGAGGGG
ATGAGCGCGC TGTTCGGCTC CAGCCTCGGC AGCCATGTGA GCGTCGTGCG GGATCTGGAG
CCCGACATGC CCTTCGCCCT GGTCGATCCC GACCAGCTCG AACTCGCGGT GCTCAACCTC
TGCATCAACG CCCGCGACGC GATGCCCGAC GGCGGCACCG TCACCATCTC GACCCGCCGC
GCCGAGATCT CCGACGATCC CGATCTCAAA CCGGGCACCT ACGCGGTCGT CTCGGTCGCC
GACGAGGGCA CCGGCATTCC GCCGGAAATT CTGGAACGGG TCTGCGAGCC GTTCTTCACC
ACCAAGGCGG TCGGGCAGGG CACCGGCCTC GGCCTCGCTA TGGTGTTCGG CCTCGCCCAG
CAAGCGGGCG GGCGGCTGCG CATCACCAGC GAAGTCGGCC AGGGCACCCG GATCGAACTG
GCGCTCCCGC GCGCCGAGAG CGCCGCCCAG GGCGTCGAAG AGCCGGCGAC CCCGGCGGTG
GTGACGGCGG CCAGTCCGGC CCGCATCCTC GTGGTCGACG ACGACGAGGA GGTGAGGCAT
GTCACCGCCT CCTTCCTCAG CGATTTCGGC TACAGCGAAA CCGAGGCCGC GGACGGGCAC
ACGGCGTTGG ACTTGATGGA GAAGGGCGAG CGCTTCGACC TCGTGGTGGC CGACCTCGCC
ATGCCCGGCA TGACCGGGGT CGAGCTCGCC GCCGCGATCC GCGAGCGTTT CTCCGGCGTG
CCGGTCCTTC TGCTGACGGG CCATGCGGAG GCCGTGCAGA TCCCCGAGGA TCTGCCGGTG
ATGACGAAGC CGTTCGCCTC CGCCGAACTC GCGGCACGGG TCTCGCAGCT TCTCGACACC
ACCGCCTGA
 
Protein sequence
MSKGTILAVD DEPDILIALE DLFEDEYRVL TSAKPEEALD ILRADPDIAV VVSDQRMPGM 
TGDALLAEAR SFHEAQAILL TGYADISAVI AALNRGGIIG YVAKPWDPTL LRATVRNAYE
RHRLGRDLAT ERALLRGLLD HAEEAISFKD ASGRFVRLNA RKASLVGGTV EACLGRTEVE
IADTPQAHEA EAADRRAVAA GEAGSTVIAR GALGAERWSH VIRVPIRGGA GEVTHLATIE
RDVTEQKSLE ARLRQSDKMQ ALGTLAGGIA HDFNNLLTAI LGSLELVGPK IADQPRVKRL
VDNATGAAQR GSALTKRLLS FSRSNDAHAR PVDPNALIEG MSALFGSSLG SHVSVVRDLE
PDMPFALVDP DQLELAVLNL CINARDAMPD GGTVTISTRR AEISDDPDLK PGTYAVVSVA
DEGTGIPPEI LERVCEPFFT TKAVGQGTGL GLAMVFGLAQ QAGGRLRITS EVGQGTRIEL
ALPRAESAAQ GVEEPATPAV VTAASPARIL VVDDDEEVRH VTASFLSDFG YSETEAADGH
TALDLMEKGE RFDLVVADLA MPGMTGVELA AAIRERFSGV PVLLLTGHAE AVQIPEDLPV
MTKPFASAEL AARVSQLLDT TA