More than 300 homologs were found in PanDaTox collection
for query gene Dbac_3118 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_3118  glucose-1-phosphate thymidylyltransferase  100 
 
 
290 aa  580  1.0000000000000001e-165  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0153  glucose-1-phosphate thymidylyltransferase  69.79 
 
 
358 aa  437  1e-121  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.34957 
 
 
-
 
NC_007519  Dde_2693  glucose-1-phosphate thymidylyltransferase  68.86 
 
 
291 aa  422  1e-117  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.468388  n/a   
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
305 aa  417  9.999999999999999e-116  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1381  glucose-1-phosphate thymidylyltransferase  64.48 
 
 
292 aa  407  1e-113  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  65.96 
 
 
293 aa  405  1.0000000000000001e-112  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  64.93 
 
 
292 aa  402  1e-111  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
289 aa  401  1e-111  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  65.48 
 
 
292 aa  397  9.999999999999999e-111  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  65.4 
 
 
289 aa  400  9.999999999999999e-111  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  63.19 
 
 
292 aa  399  9.999999999999999e-111  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  64.81 
 
 
291 aa  399  9.999999999999999e-111  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  64.58 
 
 
290 aa  398  9.999999999999999e-111  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  64.34 
 
 
292 aa  398  9.999999999999999e-111  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2896  glucose-1-phosphate thymidylyltransferase  67.13 
 
 
288 aa  400  9.999999999999999e-111  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.257197 
 
 
-
 
NC_008751  Dvul_2059  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
302 aa  398  9.999999999999999e-111  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.384582 
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  63.54 
 
 
293 aa  395  1e-109  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  63.67 
 
 
295 aa  396  1e-109  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  63.76 
 
 
287 aa  396  1e-109  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
286 aa  395  1e-109  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_008639  Cpha266_1998  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
299 aa  395  1e-109  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000687148  n/a   
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  64.01 
 
 
293 aa  394  1e-109  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  64.41 
 
 
294 aa  391  1e-108  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  62.68 
 
 
296 aa  391  1e-108  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  64.81 
 
 
296 aa  391  1e-108  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  64.77 
 
 
294 aa  393  1e-108  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  65.14 
 
 
296 aa  393  1e-108  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  64.41 
 
 
294 aa  392  1e-108  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
290 aa  391  1e-108  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  64.77 
 
 
292 aa  392  1e-108  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  65.16 
 
 
292 aa  393  1e-108  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  64.77 
 
 
292 aa  393  1e-108  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
293 aa  391  1e-108  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
289 aa  392  1e-108  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  64.41 
 
 
294 aa  391  1e-108  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
289 aa  391  1e-108  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  63.67 
 
 
294 aa  391  1e-108  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1224  glucose-1-phosphate thymidyl transferase  64.71 
 
 
289 aa  393  1e-108  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  63.67 
 
 
294 aa  391  1e-108  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  64.06 
 
 
294 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
293 aa  389  1e-107  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  63.73 
 
 
296 aa  389  1e-107  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
293 aa  390  1e-107  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
286 aa  389  1e-107  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
293 aa  389  1e-107  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  64.54 
 
 
289 aa  390  1e-107  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
293 aa  387  1e-107  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
291 aa  390  1e-107  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_013730  Slin_5841  glucose-1-phosphate thymidylyltransferase  67.73 
 
 
286 aa  389  1e-107  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.572504 
 
 
-
 
NC_010655  Amuc_0208  glucose-1-phosphate thymidylyltransferase  61.67 
 
 
287 aa  387  1e-106  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
293 aa  386  1e-106  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_013061  Phep_4022  glucose-1-phosphate thymidylyltransferase  65.6 
 
 
286 aa  387  1e-106  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0702  glucose-1-phosphate thymidylyltransferase  63.07 
 
 
307 aa  386  1e-106  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00504967  normal 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
293 aa  386  1e-106  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  63.38 
 
 
298 aa  387  1e-106  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_008528  OEOE_1449  glucose-1-phosphate thymidylyltransferase  62.15 
 
 
291 aa  387  1e-106  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  63.73 
 
 
298 aa  387  1e-106  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  62.24 
 
 
293 aa  384  1e-106  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  63.73 
 
 
298 aa  387  1e-106  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_009943  Dole_1011  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
292 aa  384  1e-106  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0305  glucose-1-phosphate thymidylyltransferase  62.41 
 
 
294 aa  382  1e-105  Campylobacter curvus 525.92  Bacteria  normal  0.132763  n/a   
 
 
-
 
NC_013132  Cpin_0181  glucose-1-phosphate thymidylyltransferase  64.58 
 
 
289 aa  383  1e-105  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1399  glucose-1-phosphate thymidylyltransferase  61.03 
 
 
290 aa  382  1e-105  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1752  glucose-1-phosphate thymidylyltransferase  61.46 
 
 
297 aa  381  1e-105  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.2486 
 
 
-
 
NC_007912  Sde_2130  glucose-1-phosphate thymidylyltransferase  61.75 
 
 
288 aa  382  1e-105  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  63.07 
 
 
305 aa  381  1e-105  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_012880  Dd703_3286  glucose-1-phosphate thymidylyltransferase  61.46 
 
 
288 aa  384  1e-105  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3038  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
292 aa  384  1e-105  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0597  glucose-1-phosphate thymidylyltransferase  61.11 
 
 
293 aa  381  1e-105  Clostridium perfringens ATCC 13124  Bacteria  normal  0.290033  n/a   
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  63.35 
 
 
297 aa  384  1e-105  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  63.03 
 
 
297 aa  381  1e-105  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  63.03 
 
 
297 aa  380  1e-104  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  62.11 
 
 
310 aa  378  1e-104  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  63.03 
 
 
297 aa  380  1e-104  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01934  hypothetical protein  65.79 
 
 
270 aa  380  1e-104  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0331  glucose-1-phosphate thymidylyltransferase  63.83 
 
 
291 aa  380  1e-104  Flavobacterium johnsoniae UW101  Bacteria  normal  0.284071  n/a   
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  61.81 
 
 
292 aa  378  1e-104  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  62.24 
 
 
304 aa  380  1e-104  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  62.11 
 
 
293 aa  378  1e-104  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3681  glucose-1-phosphate thymidylyltransferase  62.81 
 
 
293 aa  379  1e-104  Clostridium phytofermentans ISDg  Bacteria  normal  0.0233159  n/a   
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  62.68 
 
 
312 aa  379  1e-104  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_011989  Avi_1494  glucose-1-phosphate thymidylyltransferase  63.12 
 
 
287 aa  379  1e-104  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  62.32 
 
 
297 aa  379  1e-104  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  61.25 
 
 
292 aa  380  1e-104  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  63.03 
 
 
297 aa  380  1e-104  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6654  glucose-1-phosphate thymidylyltransferase  62.07 
 
 
292 aa  378  1e-104  Actinosynnema mirum DSM 43827  Bacteria  normal  0.147178  n/a   
 
 
-
 
NC_008261  CPF_0479  glucose-1-phosphate thymidylyltransferase  60.76 
 
 
293 aa  379  1e-104  Clostridium perfringens ATCC 13124  Bacteria  normal  0.778561  n/a   
 
 
-
 
NC_008321  Shewmr4_1319  glucose-1-phosphate thymidylyltransferase  62.41 
 
 
291 aa  378  1e-104  Shewanella sp. MR-4  Bacteria  normal  normal  0.0322301 
 
 
-
 
NC_011059  Paes_1760  glucose-1-phosphate thymidylyltransferase  61.86 
 
 
298 aa  378  1e-104  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0453677 
 
 
-
 
NC_010831  Cphamn1_1914  glucose-1-phosphate thymidylyltransferase  61.75 
 
 
298 aa  378  1e-104  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.00943889 
 
 
-
 
NC_008347  Mmar10_2458  glucose-1-phosphate thymidylyltransferase  61.81 
 
 
291 aa  378  1e-104  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4021  glucose-1-phosphate thymidylyltransferase  62.06 
 
 
289 aa  380  1e-104  Sphingomonas wittichii RW1  Bacteria  normal  0.401685  normal 
 
 
-
 
NC_008576  Mmc1_1406  glucose-1-phosphate thymidylyltransferase  61.81 
 
 
290 aa  379  1e-104  Magnetococcus sp. MC-1  Bacteria  normal  0.0680028  normal 
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  62.11 
 
 
293 aa  378  1e-104  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
299 aa  379  1e-104  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  60.41 
 
 
297 aa  375  1e-103  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_011989  Avi_1983  glucose-1-phosphate thymidylyltransferase  62.77 
 
 
287 aa  376  1e-103  Agrobacterium vitis S4  Bacteria  normal  0.967411  n/a   
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
297 aa  376  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  61.54 
 
 
297 aa  375  1e-103  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3029  glucose-1-phosphate thymidylyltransferase  61.75 
 
 
291 aa  375  1e-103  Shewanella baltica OS195  Bacteria  normal  normal  0.173381 
 
 
-
 
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