Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6654 |
Symbol | |
ID | 8330870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7788168 |
End bp | 7789046 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644947083 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_003104297 |
Protein GI | 256380637 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.147178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGGCG TCGTCCTCGC CGGTGGCAGC GGCACCCGGC TGCACCCGAT CACGCAGGCG GTGTCCAAGC AGCTGCTGCC CGTCTACGAC AAGCCGATGG TGTACTACCC GCTGTCGGTG CTGATGCTCG CGGGCATCCG CGAGGTGCTG CTGATCTCGA CCCCCGCCGA CCTGCCGCTG TTCCGCCGCC TGCTGGGCGA CGGCTCGCAG TTCGGCCTCC GGCTGGAGTA CGCCGAGCAG GCTCACCCGA ACGGGCTCGC CGAGGCGTTC GTGATCGGGG CCGACTTCAT CGGCGAGGAC GACGTCTCGC TCGTGCTGGG CGACAACATC TTCTACGGCC AGGGCTTCTC CAAGGTCCTC CAGGGCAACG CCGCGAACCT CGACGGGTGC GTGCTGTTCG GCTACCCCGT CAAGGACCCC GAGCGCTACG GCGTCGGCGA GGTCGACAGC TCCGGCAAGC TGCTCAGCAT CGAGGAGAAG CCCTCGGCGC CGAAGTCGAA CAAGGCCATC ACCGGCCTGT ACCTCTACGA CAACGGCGTG GTCGACATCG CCCGCTCGCT CAAGCCGTCG CCGCGCGGCG AGCTGGAGAT CACCGACGTG AACCTGGCCT ACCTGCGCGA GGGCCGGGCG CACCTGGTGG ACCTCGGGCG CGGCTTCGCC TGGCTGGACA CCGGCACGCA CGACTCGCTG CTGGAGGCCG GGCAGTTCGT GCAGGTGCTG GAGCACCGCC AGGGCGTGCG GATCGCCTGC CTGGAGGAGA TCGCCTACCG GATGGGCTTC ATCAGCGCGG AGCAGTGCTA CGCGCAGGGC GAGAAGCTCG CCAAGTCCGG GTACGGGCAG TACGTGATGA CCGTGGCCTC CGAGGGCCTG GACAAGTAG
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Protein sequence | MKGVVLAGGS GTRLHPITQA VSKQLLPVYD KPMVYYPLSV LMLAGIREVL LISTPADLPL FRRLLGDGSQ FGLRLEYAEQ AHPNGLAEAF VIGADFIGED DVSLVLGDNI FYGQGFSKVL QGNAANLDGC VLFGYPVKDP ERYGVGEVDS SGKLLSIEEK PSAPKSNKAI TGLYLYDNGV VDIARSLKPS PRGELEITDV NLAYLREGRA HLVDLGRGFA WLDTGTHDSL LEAGQFVQVL EHRQGVRIAC LEEIAYRMGF ISAEQCYAQG EKLAKSGYGQ YVMTVASEGL DK
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