Gene Amir_6654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6654 
Symbol 
ID8330870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7788168 
End bp7789046 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content69% 
IMG OID644947083 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_003104297 
Protein GI256380637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.147178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGGCG TCGTCCTCGC CGGTGGCAGC GGCACCCGGC TGCACCCGAT CACGCAGGCG 
GTGTCCAAGC AGCTGCTGCC CGTCTACGAC AAGCCGATGG TGTACTACCC GCTGTCGGTG
CTGATGCTCG CGGGCATCCG CGAGGTGCTG CTGATCTCGA CCCCCGCCGA CCTGCCGCTG
TTCCGCCGCC TGCTGGGCGA CGGCTCGCAG TTCGGCCTCC GGCTGGAGTA CGCCGAGCAG
GCTCACCCGA ACGGGCTCGC CGAGGCGTTC GTGATCGGGG CCGACTTCAT CGGCGAGGAC
GACGTCTCGC TCGTGCTGGG CGACAACATC TTCTACGGCC AGGGCTTCTC CAAGGTCCTC
CAGGGCAACG CCGCGAACCT CGACGGGTGC GTGCTGTTCG GCTACCCCGT CAAGGACCCC
GAGCGCTACG GCGTCGGCGA GGTCGACAGC TCCGGCAAGC TGCTCAGCAT CGAGGAGAAG
CCCTCGGCGC CGAAGTCGAA CAAGGCCATC ACCGGCCTGT ACCTCTACGA CAACGGCGTG
GTCGACATCG CCCGCTCGCT CAAGCCGTCG CCGCGCGGCG AGCTGGAGAT CACCGACGTG
AACCTGGCCT ACCTGCGCGA GGGCCGGGCG CACCTGGTGG ACCTCGGGCG CGGCTTCGCC
TGGCTGGACA CCGGCACGCA CGACTCGCTG CTGGAGGCCG GGCAGTTCGT GCAGGTGCTG
GAGCACCGCC AGGGCGTGCG GATCGCCTGC CTGGAGGAGA TCGCCTACCG GATGGGCTTC
ATCAGCGCGG AGCAGTGCTA CGCGCAGGGC GAGAAGCTCG CCAAGTCCGG GTACGGGCAG
TACGTGATGA CCGTGGCCTC CGAGGGCCTG GACAAGTAG
 
Protein sequence
MKGVVLAGGS GTRLHPITQA VSKQLLPVYD KPMVYYPLSV LMLAGIREVL LISTPADLPL 
FRRLLGDGSQ FGLRLEYAEQ AHPNGLAEAF VIGADFIGED DVSLVLGDNI FYGQGFSKVL
QGNAANLDGC VLFGYPVKDP ERYGVGEVDS SGKLLSIEEK PSAPKSNKAI TGLYLYDNGV
VDIARSLKPS PRGELEITDV NLAYLREGRA HLVDLGRGFA WLDTGTHDSL LEAGQFVQVL
EHRQGVRIAC LEEIAYRMGF ISAEQCYAQG EKLAKSGYGQ YVMTVASEGL DK