| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2131 |
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| Symbol | |
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| ID | 4173386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2577015 |
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| End bp | 2577908 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055139 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_661703 |
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| Protein GI | 109898448 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATC ACATTCCTAA ATATAAAGGT ATCATTTTGG CTGGGGGCTC AGGCTCCCGC
TTACATCCCA TTACGCAAGG GACATCAAAG CAACTACTGC CTATTTATGA CAAGCCAATG
ATTTACTATC CTCTTTCGGT ATTAATGCTC GCAGGTATTC GGGAAGTAAT GATCATCACC
ACTCCCGAAG ATAAAGCAAA CTTTCAACGT TTGTTAGGAG ATGGCAGTCG CTACGGCGTT
GAAATCGAAT ATGCCGTGCA GCCGAGTCCA GATGGCCTTG CTCAAGCATT TATTATTGCA
GAGGATTTTA TCGGCGATGC GAATGTCAGT TTAGTATTGG GGGATAACAT TTTTTATGGT
CAGCATTTCT CTGACAAGTT GAAAGACGCC ACCCAAGTGA CAAAAGGTGC CACCGTATTT
GGTTATCACG TCACTGACCC AGAACGCTTT GGTGTGGTTG AATTTGATAA AGATAAAAAA
GCCATCAGCA TTGAAGAGAA GCCCCTAGCG CCAAAATCAC AATATGCAGT AACAGGTTTG
TATTTTTATG ACAATGATGT CATCGACATC GCCAAAAATA TCAAACCGTC TGTGCGTGGA
GAATTGGAAA TCACCGATGT GAATTTAGCG TACCTTGAAA GAGGGGATTT ACACGTGTCG
TTATTGGGTC GTGGTTTCGC TTGGCTTGAT ACAGGTACCC ACGACTCGCT CCTTGACGCT
GGGCAGTTCG TACAAACCGT TGAGCACCGC CAAGGCTTGA AAGTGGCGTG TTTAGAAGAA
ATTGCCTATC GCAATAAATG GATAGACAAA GCGCAGTTGA CGGAACAAGG CAACAGTTTG
GCCAAAACAG GTTACGGCCA ATATTTGCTC AAAGTCGCAA ATGGTTACGA GTAA
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| Protein sequence | MANHIPKYKG IILAGGSGSR LHPITQGTSK QLLPIYDKPM IYYPLSVLML AGIREVMIIT
TPEDKANFQR LLGDGSRYGV EIEYAVQPSP DGLAQAFIIA EDFIGDANVS LVLGDNIFYG
QHFSDKLKDA TQVTKGATVF GYHVTDPERF GVVEFDKDKK AISIEEKPLA PKSQYAVTGL
YFYDNDVIDI AKNIKPSVRG ELEITDVNLA YLERGDLHVS LLGRGFAWLD TGTHDSLLDA
GQFVQTVEHR QGLKVACLEE IAYRNKWIDK AQLTEQGNSL AKTGYGQYLL KVANGYE
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