More than 300 homologs were found in PanDaTox collection
for query gene Dvul_2059 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008751  Dvul_2059  glucose-1-phosphate thymidylyltransferase  100 
 
 
302 aa  614  1e-175  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.384582 
 
 
-
 
NC_011769  DvMF_1381  glucose-1-phosphate thymidylyltransferase  81.31 
 
 
292 aa  488  1e-137  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_2693  glucose-1-phosphate thymidylyltransferase  76.04 
 
 
291 aa  464  9.999999999999999e-131  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.468388  n/a   
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  63.95 
 
 
293 aa  405  1.0000000000000001e-112  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  68.06 
 
 
293 aa  405  1.0000000000000001e-112  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  65.38 
 
 
286 aa  406  1.0000000000000001e-112  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
286 aa  405  1.0000000000000001e-112  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  65.74 
 
 
293 aa  407  1.0000000000000001e-112  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_012880  Dd703_3286  glucose-1-phosphate thymidylyltransferase  64.69 
 
 
288 aa  407  1.0000000000000001e-112  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  65.96 
 
 
289 aa  402  1e-111  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  64.93 
 
 
296 aa  401  1e-111  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  65.25 
 
 
289 aa  402  1e-111  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
292 aa  398  9.999999999999999e-111  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
293 aa  399  9.999999999999999e-111  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  65.25 
 
 
289 aa  399  9.999999999999999e-111  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  63.99 
 
 
292 aa  399  9.999999999999999e-111  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
305 aa  398  9.999999999999999e-111  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_3118  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
290 aa  398  9.999999999999999e-111  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  62.85 
 
 
293 aa  399  9.999999999999999e-111  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  63.27 
 
 
297 aa  397  1e-109  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  65.28 
 
 
294 aa  397  1e-109  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_007604  Synpcc7942_2101  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
294 aa  395  1e-109  Synechococcus elongatus PCC 7942  Bacteria  normal  0.338319  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
305 aa  395  1e-109  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
291 aa  395  1e-109  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_009832  Spro_0166  glucose-1-phosphate thymidylyltransferase  64.01 
 
 
293 aa  394  1e-109  Serratia proteamaculans 568  Bacteria  normal  0.455037  normal 
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  64.46 
 
 
292 aa  397  1e-109  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  65.16 
 
 
296 aa  395  1e-109  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03170  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
295 aa  396  1e-109  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
292 aa  392  1e-108  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  64.46 
 
 
292 aa  391  1e-108  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2342  glucose-1-phosphate thymidylyltransferase  62.98 
 
 
292 aa  394  1e-108  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  62.81 
 
 
294 aa  393  1e-108  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  61.59 
 
 
294 aa  393  1e-108  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
292 aa  393  1e-108  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
292 aa  394  1e-108  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  64.93 
 
 
296 aa  394  1e-108  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4134  glucose-1-phosphate thymidylyltransferase  64.71 
 
 
293 aa  392  1e-108  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.886764  normal 
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  61.59 
 
 
294 aa  393  1e-108  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
293 aa  388  1e-107  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
293 aa  388  1e-107  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  62.28 
 
 
310 aa  389  1e-107  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
293 aa  388  1e-107  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
295 aa  390  1e-107  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  61.11 
 
 
295 aa  390  1e-107  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  63.99 
 
 
292 aa  389  1e-107  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0774  glucose-1-phosphate thymidylyltransferase, long form  63.89 
 
 
292 aa  390  1e-107  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  62.85 
 
 
295 aa  388  1e-107  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  63.32 
 
 
293 aa  388  1e-107  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  62.46 
 
 
294 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_007641  Rru_B0048  glucose-1-phosphate thymidylyltransferase  62.59 
 
 
294 aa  390  1e-107  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.231271  n/a   
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
312 aa  388  1e-107  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  62.11 
 
 
294 aa  389  1e-107  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  63.19 
 
 
297 aa  388  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  62.85 
 
 
292 aa  390  1e-107  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
293 aa  388  1e-107  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
297 aa  390  1e-107  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0153  glucose-1-phosphate thymidylyltransferase  63.19 
 
 
358 aa  390  1e-107  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.34957 
 
 
-
 
NC_008390  Bamb_0752  glucose-1-phosphate thymidylyltransferase  64.93 
 
 
297 aa  390  1e-107  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  62.46 
 
 
294 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  62.11 
 
 
294 aa  389  1e-107  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_009801  EcE24377A_4300  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
293 aa  388  1e-107  Escherichia coli E24377A  Bacteria  normal  0.671584  n/a   
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
297 aa  389  1e-107  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  62.28 
 
 
293 aa  389  1e-107  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  63.86 
 
 
293 aa  388  1e-107  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
293 aa  388  1e-107  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
297 aa  389  1e-107  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  62.28 
 
 
293 aa  389  1e-107  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1406  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
290 aa  389  1e-107  Magnetococcus sp. MC-1  Bacteria  normal  0.0680028  normal 
 
 
-
 
NC_010468  EcolC_4214  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
293 aa  388  1e-107  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0924  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
297 aa  386  1e-106  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0626  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
294 aa  385  1e-106  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.353924 
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
297 aa  385  1e-106  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  61.38 
 
 
296 aa  387  1e-106  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_007434  BURPS1710b_3162  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
312 aa  385  1e-106  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  63.73 
 
 
291 aa  387  1e-106  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  60.8 
 
 
312 aa  387  1e-106  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3140  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
297 aa  386  1e-106  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  62.24 
 
 
297 aa  385  1e-106  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_011883  Ddes_0541  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
297 aa  385  1e-106  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  60.76 
 
 
292 aa  385  1e-106  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2754  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
297 aa  386  1e-106  Burkholderia mallei NCTC 10229  Bacteria  normal  0.119435  n/a   
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
297 aa  387  1e-106  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_009074  BURPS668_3103  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
297 aa  386  1e-106  Burkholderia pseudomallei 668  Bacteria  normal  0.0791129  n/a   
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
293 aa  386  1e-106  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_011138  MADE_00988  glucose-1-phosphate thymidylyltransferase  62.85 
 
 
293 aa  385  1e-106  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1851  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
297 aa  386  1e-106  Burkholderia mallei NCTC 10247  Bacteria  normal  0.530858  n/a   
 
 
-
 
NC_011353  ECH74115_5222  glucose-1-phosphate thymidylyltransferase  62.98 
 
 
293 aa  385  1e-106  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.350144  normal 
 
 
-
 
NC_009943  Dole_1011  glucose-1-phosphate thymidylyltransferase  64.34 
 
 
292 aa  386  1e-106  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
298 aa  382  1e-105  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_013037  Dfer_2896  glucose-1-phosphate thymidylyltransferase  63.19 
 
 
288 aa  383  1e-105  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.257197 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  62.11 
 
 
296 aa  382  1e-105  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_006348  BMA1989  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
297 aa  381  1e-105  Burkholderia mallei ATCC 23344  Bacteria  normal  0.112346  n/a   
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
297 aa  384  1e-105  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_007513  Syncc9902_0637  glucose-1-phosphate thymidylyltransferase, long form  59.8 
 
 
310 aa  382  1e-105  Synechococcus sp. CC9902  Bacteria  normal  0.210198  n/a   
 
 
-
 
NC_007760  Adeh_4290  glucose-1-phosphate thymidylyltransferase  62.85 
 
 
294 aa  382  1e-105  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_3238  glucose-1-phosphate thymidylyltransferase  63.32 
 
 
301 aa  381  1e-105  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  62.24 
 
 
297 aa  383  1e-105  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
292 aa  384  1e-105  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
291 aa  382  1e-105  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
298 aa  382  1e-105  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>