Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0123 |
Symbol | |
ID | 6407766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 134839 |
End bp | 135714 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642710032 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_001989161 |
Protein GI | 192288556 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACCA AAGGTATCAT TCTGGCCGGT GGCAGCGGAA CAAGGCTGCA TCCGATGACG GCCGCGGTGT CGAAGCAGTT GATGCCGATC TACGATAAGC CGCTGATCTA TTATCCGCTG GCCACGCTGA TGATGGCCGG CATCCGCGAT ATCCTGGTGA TCTCGACCCC CGCCGATCTG CCTCGCTTCC ACCAACTGCT CGGCGACGGC GCCTCGTGGG GCATGTCGTT CAGCTATGCC GAACAGCCGA AGCCCGAAGG GCTGGCGCAG GCGTTCATCA TCGGCGCCGA CTTCGTCGCC GGGCAGCCGT CCGCCTTAGT GCTTGGCGAC AATTTGTTCT ACGGCCACGA TCTGATCCCG CTGCTGCGGA ACGCCGCGCG GCATCCGGAG GGCGCCACGG TGTTCGCCTA TCAGGTCAGC GATCCGGAGC GTTATGGCGT CGTCGAATTC GATTCCGATC AGGTCGCGCG TTCGATCGAG GAGAAGCCGG CACGGCCGCG CTCGAATTGG GCGGTCACGG GGCTTTATTT CTACGACCAG GACGTCGTCG AGATCGCGGC GAACCTGAAG CCCTCCGCAC GCGGCGAGCT CGAGATCACC GACGTCAATC GCACATACTT GGAACGCGGC AAGCTGCGGG TCGAAAAGAT GGGCCGGGGG TTCGCCTGGC TCGACACCGG AACGCCAGAT AGCCTTATAG AAGCCGGCGA GTTCGTACGT GTGCTCGAGA AGCGCCAGGG CTTCAAGATC TGCTGCCCCG AGGAGATCGC CTTCCGGTTC GGTTGGATCG ATGCGCGACA GCTCGAACGT CTGGCGCAGC CGCTCGCCAA GAGCAATTAC GGCGGCTACC TGCTCAAGCT GGCGGCGAGC CCGTGA
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Protein sequence | MITKGIILAG GSGTRLHPMT AAVSKQLMPI YDKPLIYYPL ATLMMAGIRD ILVISTPADL PRFHQLLGDG ASWGMSFSYA EQPKPEGLAQ AFIIGADFVA GQPSALVLGD NLFYGHDLIP LLRNAARHPE GATVFAYQVS DPERYGVVEF DSDQVARSIE EKPARPRSNW AVTGLYFYDQ DVVEIAANLK PSARGELEIT DVNRTYLERG KLRVEKMGRG FAWLDTGTPD SLIEAGEFVR VLEKRQGFKI CCPEEIAFRF GWIDARQLER LAQPLAKSNY GGYLLKLAAS P
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