Gene BURPS1710b_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3162 
SymbolrfbA 
ID3690308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3470915 
End bp3471853 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content63% 
IMG OID637729617 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_334534 
Protein GI76811752 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTCGAA ACGAACTACG CGCAACGCGC GTAAAGGTTG AACCGATGGC GCGCAAGGGC 
ATTATTCTGG CCGGCGGTTC CGGCACGCGG CTGTATCCGA TCACGCATGC GGTGTCGAAG
CAGCTGTTGC CGGTCTACGA CAAGCCGATG ATCTATTACC CGCTGTCGAC GCTGATGGTG
GCGGACATTC GCGATGTGCT GATCATCTCG ACGCCGCAGG ACACGCCGCG CTTCGAGGCG
ATGCTGGGTG ACGGCAGCCA GTGGGGGATG AACATCCGCT ACGCGGTGCA GCCGTCGCCG
GACGGGCTCG CGCAGGCGTT CGTGATCGGC CGGGAATTCG TCGGCCGCGA TCCGTCGACG
CTGATTCTCG GCGACAACAT CTTCTATGGC CACGATCTCG CGAAGCAACT CGATCGGGCA
TCGGCGCGGC AGGCGGGCGC GACGGTGTTC GCATACCACG TGCACGATCC GGAGCGCTAC
GGCGTCGTCG AGTTCGACGG CGAATTCCGC GCGCTGTCGA TCGAGGAGAA GCCCGCGAAG
CCGCGCTCGA ACTACGCGGT GACGGGGCTG TACTTCTACG ACAACCAGGT GTGCGACATC
GCGGCGGACA TCAAGCCGTC CGCGCGCGGC GAGCTGGAGA TCACGGACGT GAATTCCCGC
TATCTCGCCG CGGGTTTGCT CGACGTCGAG ATCATGGGCC GCGGCTACGC GTGGCTCGAT
ACCGGCACGC ACGATTCGCT GATCGAGGCG GCGACGTTCA TCGCGACGCT GCAAAAGCGC
CAGGGGCTCG TCGTCGCGTG TCCGGAGGAG ATCGCGTATC GGCGGCAGTG GATCGACGCG
GAACAACTGC TCAAGCTCGC ACAGCCTTTG TCGAAAAATG GCTATGGCCA GTACCTGAAA
AACATTCTTA CGGATCAAGT CGCATGGCCA TCCAAGTAA
 
Protein sequence
MGRNELRATR VKVEPMARKG IILAGGSGTR LYPITHAVSK QLLPVYDKPM IYYPLSTLMV 
ADIRDVLIIS TPQDTPRFEA MLGDGSQWGM NIRYAVQPSP DGLAQAFVIG REFVGRDPST
LILGDNIFYG HDLAKQLDRA SARQAGATVF AYHVHDPERY GVVEFDGEFR ALSIEEKPAK
PRSNYAVTGL YFYDNQVCDI AADIKPSARG ELEITDVNSR YLAAGLLDVE IMGRGYAWLD
TGTHDSLIEA ATFIATLQKR QGLVVACPEE IAYRRQWIDA EQLLKLAQPL SKNGYGQYLK
NILTDQVAWP SK