More than 300 homologs were found in PanDaTox collection
for query gene Dfer_2896 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_2896  glucose-1-phosphate thymidylyltransferase  100 
 
 
288 aa  587  1e-166  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.257197 
 
 
-
 
NC_013730  Slin_5841  glucose-1-phosphate thymidylyltransferase  87.54 
 
 
286 aa  513  1e-144  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.572504 
 
 
-
 
NC_013061  Phep_4022  glucose-1-phosphate thymidylyltransferase  80.35 
 
 
286 aa  488  1e-137  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_0331  glucose-1-phosphate thymidylyltransferase  80.43 
 
 
291 aa  476  1e-133  Flavobacterium johnsoniae UW101  Bacteria  normal  0.284071  n/a   
 
 
-
 
NC_008255  CHU_3390  glucose-1-phosphate thymidylyltransferase  78.4 
 
 
288 aa  477  1e-133  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.105005 
 
 
-
 
NC_013132  Cpin_0181  glucose-1-phosphate thymidylyltransferase  73.87 
 
 
289 aa  452  1.0000000000000001e-126  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_13103  glucose-1-phosphate thymidylyltransferase  74.73 
 
 
286 aa  444  1e-123  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  69.2 
 
 
289 aa  417  9.999999999999999e-116  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  68.77 
 
 
292 aa  415  9.999999999999999e-116  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  67.71 
 
 
293 aa  413  1e-114  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  69.93 
 
 
292 aa  413  1e-114  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  68.42 
 
 
292 aa  410  1e-114  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  68.07 
 
 
292 aa  410  1e-113  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  68.42 
 
 
292 aa  409  1e-113  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  69.12 
 
 
296 aa  407  1e-113  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  68.07 
 
 
293 aa  407  1e-113  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  69.23 
 
 
292 aa  410  1e-113  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  70.92 
 
 
290 aa  409  1e-113  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_008532  STER_1224  glucose-1-phosphate thymidyl transferase  68.17 
 
 
289 aa  410  1e-113  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  68.64 
 
 
293 aa  407  1e-113  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  67.37 
 
 
294 aa  405  1.0000000000000001e-112  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  67.72 
 
 
294 aa  406  1.0000000000000001e-112  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  68.42 
 
 
293 aa  407  1.0000000000000001e-112  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0702  glucose-1-phosphate thymidylyltransferase  67.6 
 
 
307 aa  404  1.0000000000000001e-112  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00504967  normal 
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  69.82 
 
 
296 aa  404  1.0000000000000001e-112  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  67.72 
 
 
294 aa  407  1.0000000000000001e-112  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  68.29 
 
 
293 aa  405  1.0000000000000001e-112  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  68.42 
 
 
305 aa  405  1.0000000000000001e-112  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  68.18 
 
 
287 aa  407  1.0000000000000001e-112  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  67.72 
 
 
294 aa  406  1.0000000000000001e-112  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  67.72 
 
 
294 aa  406  1.0000000000000001e-112  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  68.29 
 
 
293 aa  405  1.0000000000000001e-112  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
305 aa  405  1.0000000000000001e-112  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  67.37 
 
 
296 aa  406  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1190  glucose-1-phosphate thymidylyltransferase  65.96 
 
 
294 aa  404  1e-111  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal  0.0390929 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  68.07 
 
 
296 aa  403  1e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  67.37 
 
 
294 aa  401  1e-111  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  68.07 
 
 
292 aa  403  1e-111  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  66.09 
 
 
290 aa  403  1e-111  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  67.36 
 
 
293 aa  403  1e-111  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_014151  Cfla_2349  glucose-1-phosphate thymidylyltransferase  67.26 
 
 
290 aa  404  1e-111  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0181385  hitchhiker  0.00000600969 
 
 
-
 
NC_011886  Achl_2410  glucose-1-phosphate thymidylyltransferase  65.62 
 
 
290 aa  402  1e-111  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.140851 
 
 
-
 
NC_013530  Xcel_2557  glucose-1-phosphate thymidylyltransferase  67.62 
 
 
287 aa  398  9.999999999999999e-111  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0967265  n/a   
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
296 aa  398  9.999999999999999e-111  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_013521  Sked_09040  Glucose-1-phosphate thymidylyltransferase  67.62 
 
 
292 aa  398  9.999999999999999e-111  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.00724889  normal  0.162392 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  65.51 
 
 
291 aa  399  9.999999999999999e-111  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_3118  glucose-1-phosphate thymidylyltransferase  67.13 
 
 
290 aa  400  9.999999999999999e-111  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4021  glucose-1-phosphate thymidylyltransferase  65.73 
 
 
289 aa  399  9.999999999999999e-111  Sphingomonas wittichii RW1  Bacteria  normal  0.401685  normal 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  66.78 
 
 
289 aa  400  9.999999999999999e-111  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_008541  Arth_2688  glucose-1-phosphate thymidylyltransferase  64.46 
 
 
287 aa  400  9.999999999999999e-111  Arthrobacter sp. FB24  Bacteria  normal  0.0105243  n/a   
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  67.94 
 
 
293 aa  400  9.999999999999999e-111  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  66.43 
 
 
299 aa  399  9.999999999999999e-111  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  67.13 
 
 
289 aa  397  9.999999999999999e-111  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
296 aa  394  1e-109  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  65.61 
 
 
293 aa  395  1e-109  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  65.29 
 
 
293 aa  395  1e-109  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3295  glucose-1-phosphate thymidylyltransferase  67.62 
 
 
289 aa  394  1e-109  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.092975  normal  0.141997 
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  67.61 
 
 
293 aa  394  1e-109  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
297 aa  395  1e-109  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4306  glucose-1-phosphate thymidylyltransferase  65.51 
 
 
290 aa  395  1e-109  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.204948  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
297 aa  395  1e-109  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
291 aa  394  1e-109  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  67.13 
 
 
291 aa  395  1e-109  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  68.18 
 
 
294 aa  393  1e-108  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_014158  Tpau_0055  glucose-1-phosphate thymidylyltransferase  65.03 
 
 
290 aa  391  1e-108  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0829752  n/a   
 
 
-
 
NC_012892  B21_01934  hypothetical protein  69.92 
 
 
270 aa  393  1e-108  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
296 aa  393  1e-108  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
296 aa  391  1e-108  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2693  glucose-1-phosphate thymidylyltransferase  64.36 
 
 
291 aa  391  1e-108  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.468388  n/a   
 
 
-
 
NC_011989  Avi_1494  glucose-1-phosphate thymidylyltransferase  67.01 
 
 
287 aa  391  1e-108  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  65.28 
 
 
293 aa  394  1e-108  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1983  glucose-1-phosphate thymidylyltransferase  67.01 
 
 
287 aa  391  1e-108  Agrobacterium vitis S4  Bacteria  normal  0.967411  n/a   
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  67.02 
 
 
293 aa  392  1e-108  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  65.96 
 
 
297 aa  391  1e-108  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8194  glucose-1-phosphate thymidylyltransferase  64.58 
 
 
289 aa  392  1e-108  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  65.85 
 
 
297 aa  391  1e-108  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  65.85 
 
 
297 aa  392  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
298 aa  392  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
298 aa  392  1e-108  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  65.85 
 
 
297 aa  391  1e-108  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_009712  Mboo_1752  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
297 aa  388  1e-107  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.2486 
 
 
-
 
NC_002947  PP_1783  glucose-1-phosphate thymidylyltransferase  67.37 
 
 
293 aa  389  1e-107  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00712451 
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  64.81 
 
 
295 aa  388  1e-107  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3286  glucose-1-phosphate thymidylyltransferase  65.03 
 
 
288 aa  390  1e-107  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
312 aa  388  1e-107  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1270  glucose-1-phosphate thymidylyltransferase  65.61 
 
 
289 aa  390  1e-107  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.106852  normal  0.0645307 
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  65.51 
 
 
312 aa  389  1e-107  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_011369  Rleg2_1181  glucose-1-phosphate thymidylyltransferase  65.61 
 
 
289 aa  390  1e-107  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.25108  normal  0.28241 
 
 
-
 
NC_011138  MADE_00988  glucose-1-phosphate thymidylyltransferase  65.51 
 
 
293 aa  390  1e-107  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  66.78 
 
 
286 aa  390  1e-107  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  65.84 
 
 
298 aa  388  1e-107  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  65.96 
 
 
286 aa  388  1e-107  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  64.93 
 
 
305 aa  390  1e-107  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_008781  Pnap_3489  glucose-1-phosphate thymidylyltransferase  64.81 
 
 
295 aa  389  1e-107  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.374251 
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
293 aa  387  1e-106  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
292 aa  385  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  65.73 
 
 
289 aa  387  1e-106  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  64.34 
 
 
292 aa  386  1e-106  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  63.99 
 
 
295 aa  384  1e-106  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_008639  Cpha266_1998  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
299 aa  387  1e-106  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000687148  n/a   
 
 
-
 
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