Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0684 |
Symbol | rfbA |
ID | 1219489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 732123 |
End bp | 733001 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237043 |
Product | glucose-1-phosphate thymidylyltransferase protein |
Protein accession | NP_518805 |
Protein GI | 17545403 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAG GCATTATCCT GGCCGGAGGC TCCGGCACGC GACTCTATCC GATCACCCGC TCGGTTTCGA AGCAGCTGCT GCCGGTGTAC GACAAGCCGA TGATCTACTA TCCGCTGTCC ACGCTGATGC TGGCGGGGAT TCGCGACATC CTGATCATCT CCACGCCGGA AGACACGCCG CGCTTCACCG ACATGCTCGG CGACGGCAGC AAGTGGGGGA TCAACCTGCA GTACGCGGTG CAGCCTTCGC CGGATGGGCT GGCGCAGGCG TTCATCATCG GGCGCGATTT CGTCGGCAAC GATCCGTCGA CGCTGATCCT CGGCGACAAC ATCTTCCACG GCCACGACCT CGTGGCCCAG CTGACGCGTT CGGCCGAGCA GCAGGCGGGC GCCACCGTCT TCGCCTATCA CGTCCACGAT CCGGAGCGCT ACGGCGTGGT CGAGTTCGAC CAGAACTTCC GTGCGCTCTC CCTGGAGGAG AAGCCGGCCA AGCCGCGTTC GCACTACGCC GTTACCGGGC TGTACTTCTA CGACAACCAG GTGTGCGACA TCGCCGCCGA CATCAAGCCG TCGGCTCGCG GCGAGCTCGA GATCACGGAC GTCAACAAGC ACTACCTGGC GCAGGGCCAG CTCGACGTCG AGATCATGGG CCGCGGCTAT GCCTGGCTCG ACACCGGCAC GCACGATTCG CTGCTGGAAG CGGCGATGTT CATCGCGACG CTGCAAAACC GGCAGGGGCT GATGGTGGCC TGCCCCGAAG AGATCGCGTA CCGCAATCGC TGGATCAGCG CCGAGCAGGT TGCCGCGCTG GCCAAGCCGC TGAGCAAGAA TGGCTACGGC CAGTATCTGC AGCACATCAT TTCGGAAACC GTCAAATGA
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Protein sequence | MRKGIILAGG SGTRLYPITR SVSKQLLPVY DKPMIYYPLS TLMLAGIRDI LIISTPEDTP RFTDMLGDGS KWGINLQYAV QPSPDGLAQA FIIGRDFVGN DPSTLILGDN IFHGHDLVAQ LTRSAEQQAG ATVFAYHVHD PERYGVVEFD QNFRALSLEE KPAKPRSHYA VTGLYFYDNQ VCDIAADIKP SARGELEITD VNKHYLAQGQ LDVEIMGRGY AWLDTGTHDS LLEAAMFIAT LQNRQGLMVA CPEEIAYRNR WISAEQVAAL AKPLSKNGYG QYLQHIISET VK
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