Gene Dbac_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3118 
Symbol 
ID8378813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3530397 
End bp3531269 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content56% 
IMG OID645002353 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_003159609 
Protein GI256830881 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAA TCATTCTGGC CGGAGGATCG GGCACCCGCC TTTATCCCTT GACCCTCGGC 
ACCAGCAAGC AGCTTCTTCC CGTTTATGAC AAGCCCCTTA TCTACTATCC CCTCTCCATT
CTCATGCTGG CGGGAATTAA AGACATCCTC ATCATCTCGA CGCCCCAGGA CCTGCCGCGC
TTCAAGGATG TGCTCGGAGA CGGCAGCCAC CTTGGCCTCA CTTTTTCCTA CATAGCGCAG
CCTTCGCCCG ACGGTCTGGC CCAGGCCTTC ATCCTGGGCG CGGACTTCAT CGGGCAGGAC
AGCGTCTGCC TTGTCCTGGG CGACAACATC ATCTACGGCG AAGGCCTGTC CAAGGTCCTC
AAAGACTGCG CCGAACTTGA CAAGGGCGGC ATCGTCTTCG GCTATCCGGT CAAGGACCCG
CAACGCTACG GAGTCGTTGA GTTCGACTCT TCTGGCCAGG TCGTCAGCAT CGAGGAAAAG
CCGCTCAAAC CAAAATCAAA GTATGTTATC CCGGGTATTT ATTTCTACGA CAACGCTGTT
GTCGACATCG CGAAAAAGCT GCGGCCTTCC CCGCGCGGAG AGCTTGAGAT CACCGATGTC
AATCGCGAAT ACCTGCGCCG AGGCAGCCTC AAAGTTGAGC TGCTCGGCCG CGGATATGCC
TGGCTGGACG CCGGAACCCA CGAATCCCTG CAGCAGGCCG GCAGCTTTGT GCAAGCCATC
CAGGACAGGC AGGGCTTCAA GATCGCCTGC ATCGAAGAGA TCGCTTTTTC AAAAGGGTTC
ATCGACGCGG AGCAACTCAA GCTCCTGGCC GCAAAATTCA AAAAAAACGA GTACGGAAAA
TATCTGCATG AAATCGCCGA AGAGTCATTT TAA
 
Protein sequence
MKGIILAGGS GTRLYPLTLG TSKQLLPVYD KPLIYYPLSI LMLAGIKDIL IISTPQDLPR 
FKDVLGDGSH LGLTFSYIAQ PSPDGLAQAF ILGADFIGQD SVCLVLGDNI IYGEGLSKVL
KDCAELDKGG IVFGYPVKDP QRYGVVEFDS SGQVVSIEEK PLKPKSKYVI PGIYFYDNAV
VDIAKKLRPS PRGELEITDV NREYLRRGSL KVELLGRGYA WLDAGTHESL QQAGSFVQAI
QDRQGFKIAC IEEIAFSKGF IDAEQLKLLA AKFKKNEYGK YLHEIAEESF