| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0517 |
|---|
| Symbol | rfbA |
|---|
| ID | 5798980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 541552 |
|---|
| End bp | 542433 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641338522 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_001605114 |
|---|
| Protein GI | 162418803 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA TAATTCTGGC TGGTGGTTCA GGTTCCCGAT TACACCCCAT CACCCGTGGC
GTCTCTAAGC AGTTGCTTCC CATCTACGAT AAACCCATGA TCTATTACCC GCTGTCAGTA
TTGATGCTGG CAGGGATCCG TGACGTGTTG ATTATCTCAA CCCCGGAAGA CTTACCATCG
TTTCAGCGTT TGTTGGGCAA CGGTGATGAG TTTGGTATTA ATCTGAGTTA TGCCGCGCAG
CCTAGCCCAG ACGGGCTGGC ACAGGCATTT ATCATTGGTG AAGCGTTTAT TGATAATGAG
CCATGCTGTT TGGTGCTCGG TGATAATATC TACTTCGGCC AAGGCTTTAG TCCAAAACTG
AAAGCTGTCG CCGCGCGTCA GCAGGGCGCG ACTGTTTTCG GCTATCAGGT GATGGATCCA
GAGCGCTTTG GCGTAGTGGA GTTTGATGAC AACTTCCGCG CGTTGTCTAT TGAAGAAAAA
CCGAGCCAGC CAAAATCAAA TTGGGCGGTG ACCGGGCTCT ATTTCTACGA TAACCAAGTG
GTTGATTTTG CCAAGCAGGT TAAACCTTCT GCTCGCGGTG AACTGGAAAT TACCAGCATT
AATCAAATGT ATCTGGATCG CGGTGAGTTA ACGGTTGAGC TGCTAGGGCG CGGTTTTGCT
TGGCTGGATA CCGGCACCCA TGACAGCCTG ATCGAAGCCA GTACTTTTGT TCAAACGGTT
GAAAAACGCC AAGGTTTTAA AATTGCTTGT TTGGAAGAGA TTGCCTGGCG TAACGGTTGG
TTGGATGATG ATGGCGTAAA ACGTGCGGCA ACCGCGCTGG CGAAAACCGG TTATGGCAAA
TATCTGTTGG ATCTATTACA TGCCCGTCCA CGCCAGTATT GA
|
|---|
| Protein sequence | MKGIILAGGS GSRLHPITRG VSKQLLPIYD KPMIYYPLSV LMLAGIRDVL IISTPEDLPS
FQRLLGNGDE FGINLSYAAQ PSPDGLAQAF IIGEAFIDNE PCCLVLGDNI YFGQGFSPKL
KAVAARQQGA TVFGYQVMDP ERFGVVEFDD NFRALSIEEK PSQPKSNWAV TGLYFYDNQV
VDFAKQVKPS ARGELEITSI NQMYLDRGEL TVELLGRGFA WLDTGTHDSL IEASTFVQTV
EKRQGFKIAC LEEIAWRNGW LDDDGVKRAA TALAKTGYGK YLLDLLHARP RQY
|
|---|
| |