Gene Bcenmc03_6247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6247 
Symbol 
ID6125174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp247655 
End bp248551 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID641647264 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001773861 
Protein GI170734747 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0385422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.992107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAG CGATTGGCCG TAAAGGACTG ATTCTGGCGG GCGGCTCGGG CACCCGGCTC 
CATCCGCTCA CGCATTCGGT ATCGAAGCAG TTGATGCCGG TGTACGACAA ACCGATGATC
TATTACCCGC TCAGCACGAT CATGCTGTCG GGCATCCGCG ACGTGCTGAT CATCTCGACG
CCGCGCGATC TCGACGCGTT CCAGCAACTG CTCGGCGACG GCAGCCAGTG GGGCATGAGC
TTTTCGTATG CGGTGCAGCC GAGTCCCGAC GGGCTTGCCC AGGCGTTCGT GATCGGCGCG
CCGTTCATCG GTCGCGACGC GGCGACGCTC GTGCTCGGCG ACAACATCTA TCACGGGCCC
GCGCTGTCGT CGCTGCTGCA GCAGGCCGCC GCACGGACCA CCGGCGCGAC CGTGTTCGGC
TACTACGTGC GCGATCCGGA GCGCTACGGC GTCGTGTCGT TCGATGCGGA TGGCCGCGCG
ATCGACCTCG AGGAGAAACC GCGCGAGCCG AAGTCGAACT ACGCGGTCAC CGGCCTCTAT
TTCTACGACA ACGACGTCGT CGAACTGGCG AAGGCCGTGC GCCCGTCCGC GCGCGGCGAG
CTGGAAATCA CCGACCTGAA CCTCGCGTAT CTCGCGCGCG GCGCACTGAA CGTCGAGCTA
CTCGGGCGCG GCTACGCATG GCTCGACACC GGCACGCACG AATCGCTGCT AGACGCGGCC
AATTTCATCC AGGTGATGCA GGCGCGGCAG GGCCTGCAAA TCGCGTGTCC GGAGGAAATC
GCGTACCGGC TCGGCTGGAT CGATGCGGAG CAGCTCGAAA CGCTCGCCCA CAAGCTCGCG
AAAAGCGGTT ACGGCCGCTA TCTACTCGAT CTGCTGAGCA AGGAGGTCGC GGCATGA
 
Protein sequence
MQTAIGRKGL ILAGGSGTRL HPLTHSVSKQ LMPVYDKPMI YYPLSTIMLS GIRDVLIIST 
PRDLDAFQQL LGDGSQWGMS FSYAVQPSPD GLAQAFVIGA PFIGRDAATL VLGDNIYHGP
ALSSLLQQAA ARTTGATVFG YYVRDPERYG VVSFDADGRA IDLEEKPREP KSNYAVTGLY
FYDNDVVELA KAVRPSARGE LEITDLNLAY LARGALNVEL LGRGYAWLDT GTHESLLDAA
NFIQVMQARQ GLQIACPEEI AYRLGWIDAE QLETLAHKLA KSGYGRYLLD LLSKEVAA