More than 300 homologs were found in PanDaTox collection
for query gene PXO_03170 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_03170  glucose-1-phosphate thymidylyltransferase  100 
 
 
295 aa  607  1e-173  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0504  glucose-1-phosphate thymidylyltransferase  87.46 
 
 
295 aa  538  9.999999999999999e-153  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0219924  normal  0.028839 
 
 
-
 
NC_010577  XfasM23_0196  glucose-1-phosphate thymidylyltransferase  78.08 
 
 
295 aa  474  1e-133  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0225  glucose-1-phosphate thymidylyltransferase  77.05 
 
 
295 aa  466  9.999999999999999e-131  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1283  glucose-1-phosphate thymidylyltransferase  69.15 
 
 
295 aa  427  1e-118  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  69.79 
 
 
292 aa  426  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
292 aa  422  1e-117  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  69.66 
 
 
297 aa  422  1e-117  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  69.1 
 
 
294 aa  419  1e-116  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  70.18 
 
 
297 aa  419  1e-116  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  70.18 
 
 
297 aa  421  1e-116  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0752  glucose-1-phosphate thymidylyltransferase  70.18 
 
 
297 aa  419  1e-116  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  70.18 
 
 
297 aa  420  1e-116  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
296 aa  414  9.999999999999999e-116  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  69.07 
 
 
293 aa  417  9.999999999999999e-116  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  70.21 
 
 
297 aa  416  9.999999999999999e-116  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  69.82 
 
 
312 aa  417  9.999999999999999e-116  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  70.18 
 
 
297 aa  414  9.999999999999999e-116  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  70.18 
 
 
297 aa  417  9.999999999999999e-116  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  69.12 
 
 
296 aa  415  9.999999999999999e-116  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  66.78 
 
 
293 aa  412  1e-114  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  67.47 
 
 
295 aa  412  1e-114  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  68.62 
 
 
297 aa  414  1e-114  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  70.18 
 
 
297 aa  413  1e-114  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  67.82 
 
 
295 aa  414  1e-114  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0639  glucose-1-phosphate thymidylyltransferase  68.28 
 
 
294 aa  412  1e-114  Ralstonia pickettii 12J  Bacteria  normal  normal  0.477683 
 
 
-
 
NC_009379  Pnuc_0255  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
309 aa  409  1e-113  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.201113  n/a   
 
 
-
 
NC_008836  BMA10229_A2754  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
297 aa  408  1e-113  Burkholderia mallei NCTC 10229  Bacteria  normal  0.119435  n/a   
 
 
-
 
NC_007434  BURPS1710b_3162  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
312 aa  408  1e-113  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6254  glucose-1-phosphate thymidylyltransferase  67.6 
 
 
295 aa  410  1e-113  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  68.44 
 
 
292 aa  410  1e-113  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  68.79 
 
 
305 aa  408  1e-113  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  67.59 
 
 
292 aa  407  1e-113  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
297 aa  410  1e-113  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
294 aa  408  1e-113  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_009074  BURPS668_3103  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
297 aa  408  1e-113  Burkholderia pseudomallei 668  Bacteria  normal  0.0791129  n/a   
 
 
-
 
NC_009080  BMA10247_1851  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
297 aa  408  1e-113  Burkholderia mallei NCTC 10247  Bacteria  normal  0.530858  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0924  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
297 aa  408  1e-113  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3140  glucose-1-phosphate thymidylyltransferase  69.47 
 
 
297 aa  408  1e-113  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  69.1 
 
 
291 aa  409  1e-113  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  67.01 
 
 
292 aa  406  1.0000000000000001e-112  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  67.93 
 
 
292 aa  407  1.0000000000000001e-112  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1989  glucose-1-phosphate thymidylyltransferase  69.12 
 
 
297 aa  404  1.0000000000000001e-112  Burkholderia mallei ATCC 23344  Bacteria  normal  0.112346  n/a   
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  68.04 
 
 
293 aa  404  1.0000000000000001e-112  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  66.21 
 
 
294 aa  406  1.0000000000000001e-112  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  65.87 
 
 
294 aa  405  1.0000000000000001e-112  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
289 aa  405  1.0000000000000001e-112  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  65.87 
 
 
294 aa  405  1.0000000000000001e-112  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  67.6 
 
 
296 aa  403  1e-111  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  67.61 
 
 
296 aa  401  1e-111  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_007513  Syncc9902_0637  glucose-1-phosphate thymidylyltransferase, long form  66.67 
 
 
310 aa  402  1e-111  Synechococcus sp. CC9902  Bacteria  normal  0.210198  n/a   
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  66.44 
 
 
291 aa  404  1e-111  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
292 aa  403  1e-111  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
294 aa  401  1e-111  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  65.53 
 
 
294 aa  403  1e-111  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
292 aa  401  1e-111  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
293 aa  403  1e-111  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
286 aa  404  1e-111  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  67.7 
 
 
293 aa  402  1e-111  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0279  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
309 aa  400  9.999999999999999e-111  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.643202  normal 
 
 
-
 
NC_008825  Mpe_A0626  glucose-1-phosphate thymidylyltransferase  67.14 
 
 
294 aa  399  9.999999999999999e-111  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.353924 
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  66.08 
 
 
293 aa  398  9.999999999999999e-111  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  65.52 
 
 
298 aa  398  9.999999999999999e-111  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
292 aa  400  9.999999999999999e-111  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_3238  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
301 aa  398  9.999999999999999e-111  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
291 aa  400  9.999999999999999e-111  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  66.43 
 
 
293 aa  399  9.999999999999999e-111  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  65.52 
 
 
298 aa  398  9.999999999999999e-111  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  65.14 
 
 
286 aa  399  9.999999999999999e-111  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  65.49 
 
 
293 aa  400  9.999999999999999e-111  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  64.79 
 
 
293 aa  395  1e-109  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  64.79 
 
 
293 aa  395  1e-109  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4214  glucose-1-phosphate thymidylyltransferase  64.79 
 
 
293 aa  395  1e-109  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  67.13 
 
 
293 aa  397  1e-109  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_007760  Adeh_4290  glucose-1-phosphate thymidylyltransferase  65.28 
 
 
294 aa  397  1e-109  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
289 aa  397  1e-109  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4300  glucose-1-phosphate thymidylyltransferase  64.79 
 
 
293 aa  395  1e-109  Escherichia coli E24377A  Bacteria  normal  0.671584  n/a   
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  65.75 
 
 
299 aa  395  1e-109  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  67.13 
 
 
293 aa  395  1e-109  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  64.79 
 
 
293 aa  395  1e-109  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  64.79 
 
 
293 aa  395  1e-109  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  65.85 
 
 
292 aa  396  1e-109  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  64.79 
 
 
293 aa  395  1e-109  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
305 aa  395  1e-109  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  64.79 
 
 
293 aa  395  1e-109  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2059  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
302 aa  396  1e-109  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.384582 
 
 
-
 
NC_010803  Clim_1781  glucose-1-phosphate thymidylyltransferase  65.16 
 
 
298 aa  391  1e-108  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000367124  n/a   
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  63.16 
 
 
295 aa  393  1e-108  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  66.32 
 
 
293 aa  394  1e-108  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_011353  ECH74115_5222  glucose-1-phosphate thymidylyltransferase  64.44 
 
 
293 aa  392  1e-108  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.350144  normal 
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  64.38 
 
 
312 aa  393  1e-108  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2101  glucose-1-phosphate thymidylyltransferase  65.05 
 
 
294 aa  391  1e-108  Synechococcus elongatus PCC 7942  Bacteria  normal  0.338319  normal 
 
 
-
 
NC_007614  Nmul_A0266  glucose-1-phosphate thymidylyltransferase  67.35 
 
 
295 aa  392  1e-108  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.643913  n/a   
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  63.03 
 
 
294 aa  393  1e-108  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6726  glucose-1-phosphate thymidylyltransferase  66.08 
 
 
317 aa  393  1e-108  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
289 aa  392  1e-108  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  64.48 
 
 
298 aa  394  1e-108  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_008576  Mmc1_1406  glucose-1-phosphate thymidylyltransferase  65.12 
 
 
290 aa  391  1e-108  Magnetococcus sp. MC-1  Bacteria  normal  0.0680028  normal 
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  62.32 
 
 
293 aa  392  1e-108  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  63.03 
 
 
294 aa  393  1e-108  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
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