Gene Bcen2424_6649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6649 
Symbol 
ID4454169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp877755 
End bp878651 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID639698711 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_840271 
Protein GI116687024 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAG CGATTGGCCG TAAAGGACTG ATTCTGGCGG GCGGCTCGGG CACCCGGCTC 
CATCCGCTCA CGCATTCGGT ATCGAAGCAA TTGATGCCGG TGTACGACAA ACCGATGATC
TATTACCCGC TCAGCACGAT CATGCTGTCG GGCATCCGCG ACGTGCTGAT CATCTCGACG
CCGCGCGATC TCGACGCGTT CCAGCAACTG CTCGGCGACG GCAGCCAGTG GGGCATGAGC
TTTTCGTATG CGGTGCAGCC GAGCCCCGAC GGGCTTGCGC AGGCGTTCGT GATCGGCGCG
CCGTTCATCG GTCGCGACGC GGCGACGCTC GTGCTCGGCG ACAACATCTA TCACGGGCCC
GCGCTGTCGT CGCTGCTGCA GCAAGCCGCC GCACGGACCG CCGGCGCGAC CGTGTTCGGC
TATTACGTGC GCGATCCGGA GCGCTACGGC GTCGTGTCGT TCGATGCGGA TGGCCGCGCG
ATCGACCTCG AGGAGAAACC GCGCGAGCCG AAGTCGAACT ACGCGGTCAC CGGCCTCTAT
TTCTACGACA ACGACGTCGT CGAACTGGCG AAGGCCGTGC GACCGTCCGC GCGCGGCGAG
CTGGAAATCA CCGACCTGAA CCTCGCGTAT CTCGCGCGCG GCACGCTGAA CGTCGAGCTA
CTCGGGCGCG GCTACGCATG GCTCGACACC GGCACGCACG AATCGCTGCT CGACGCGGCC
AATTTCATCC AGGTGATGCA GGCGCGACAG GGTCTGCAAA TCGCGTGTCC CGAGGAAATT
GCGTACCGGC TCGGCTGGAT CGATGCGGAG CAGCTCGAAA CGCTCGCGCA CAAGCTCGCG
AAAAGCGGTT ACGGCCGCTA TCTGCTCGAT CTGCTGAGCA AGGAGGTCGC GGCATGA
 
Protein sequence
MQTAIGRKGL ILAGGSGTRL HPLTHSVSKQ LMPVYDKPMI YYPLSTIMLS GIRDVLIIST 
PRDLDAFQQL LGDGSQWGMS FSYAVQPSPD GLAQAFVIGA PFIGRDAATL VLGDNIYHGP
ALSSLLQQAA ARTAGATVFG YYVRDPERYG VVSFDADGRA IDLEEKPREP KSNYAVTGLY
FYDNDVVELA KAVRPSARGE LEITDLNLAY LARGTLNVEL LGRGYAWLDT GTHESLLDAA
NFIQVMQARQ GLQIACPEEI AYRLGWIDAE QLETLAHKLA KSGYGRYLLD LLSKEVAA