| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2220 |
|---|
| Symbol | rfbA |
|---|
| ID | 6796453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2133536 |
|---|
| End bp | 2134420 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642776428 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_002147053 |
|---|
| Protein GI | 197249151 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.281714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGA AAACGCGTAA GGGCATTATT TTAGCGGGGG GCTCCGGCAC TCGTCTTTAT
CCGGTGACCA TGGCGGTAAG TAAGCAATTG CTACCAATTT ATGATAAACC GATGATTTAC
TATCCCCTTT CCACGCTTAT GCTGGCAGGC ATTCGGGATA TCCTGATCAT CAGTACGCCA
CAGGACACGC CGCGTTTTCA ACAACTACTG GGAGACGGCA GCCAGTGGGG GCTGAATCTT
CAATATAAAG TACAGCCAAG CCCGGATGGC TTAGCACAGG CGTTTATTAT TGGTGAAGAG
TTCATTGGTC ATGATGATTG TGCATTAGTA CTGGGTGACA ATATCTTCTA TGGTCATGAT
TTACCAAAGT TAATGGAAGC TGCCGTTAAT AAAGAAAGTG GTGCTACCGT CTTTGCTTAT
CATGTAAACG ATCCGGAGCG CTACGGTGTG GTTGAGTTTG ACCAAAGTGG CACAGCCGTT
AGTCTGGAGG AAAAACCGTT ACAACCGAAG AGTAATTACG CGGTAACGGG GCTGTATTTT
TATGATAATA GCGTGGTGGA GATGGCGAAA AATCTTAAGC CTTCCGCTCG CGGTGAGTTA
GAAATCACGG ATATTAACCG TATCTATATG GATCAGGGAA GATTGTCTGT CGCTATGATG
GGGCGCGGTT ATGCCTGGCT GGATACAGGG ACGCATCAGA GTTTGATAGA GGCCAGTAAT
TTTATTGCAA CCATCGAAGA ACGCCAGGGG CTAAAAGTGT CCTGCCCGGA AGAAATCGCA
TTTCGTAAAA ATTTTATAAA TGCACAACAG GTTATAGAAC TGGCCGGGCC ATTATCAAAA
AATGATTATG GCAAATATTT GCTGAAGATG GTGAAAGGTT TATAA
|
|---|
| Protein sequence | MEMKTRKGII LAGGSGTRLY PVTMAVSKQL LPIYDKPMIY YPLSTLMLAG IRDILIISTP
QDTPRFQQLL GDGSQWGLNL QYKVQPSPDG LAQAFIIGEE FIGHDDCALV LGDNIFYGHD
LPKLMEAAVN KESGATVFAY HVNDPERYGV VEFDQSGTAV SLEEKPLQPK SNYAVTGLYF
YDNSVVEMAK NLKPSARGEL EITDINRIYM DQGRLSVAMM GRGYAWLDTG THQSLIEASN
FIATIEERQG LKVSCPEEIA FRKNFINAQQ VIELAGPLSK NDYGKYLLKM VKGL
|
|---|
| |