| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3970 |
|---|
| Symbol | |
|---|
| ID | 3749155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 891520 |
|---|
| End bp | 892413 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637762249 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_368213 |
|---|
| Protein GI | 78065444 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00629806 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.592005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA AAGGCATCAT TCTCGCCGGC GGTTCAGGCA CACGGCTCTA TCCGATCACG
CATGCAGTAT CGAAGCAACT GCTGCCGGTG TACGACAAGC CGATGATCTA CTATCCGCTG
TCGACGCTGA TGATTGCAGG CATCCGGGAC GTGCTGATCA TCTCGACGCC GCAGGACACC
CCGCGCTTCG AGTCGATGCT CGGCGACGGC GGCCAGTGGG GGATGAATAT CCGGTATGCG
ACACAGCCGT CGCCGGACGG GCTTGCGCAA GCGTTCGTCA TCGGCCGGGA CTTCGTTGGC
AACGAGCCGT CGGCGCTCAT CCTCGGCGAC AACATTTTCT ACGGGCACGA TCTCGCGAAG
CAGCTCGAGC GGGCCAGCGC GAAGGATGCG GGCGCGACCG TATTTGCGTA TCACGTTCAG
GACCCTGAGC GGTATGGCGT GGTCGAGTTC GACCGCGAAT TCCGCGCGAT ATCGATTGAA
GAGAAGCCGG CAAAGCCGCG TTCGAGCTAT GCGGTCACGG GGCTGTATTT CTACGACACG
CAGGTTTGCG ACATCGCAGC CGACATCAAG CCGTCGGCGC GCGGCGAGCT CGAGATCACC
GATGTCAATT CGCGCTACCT GGCGGCGGGC CAACTCGACG TCGAGCTCAT GGGGCGCGGT
TATGCGTGGC TCGATACGGG TACGCACGAC TCCTTGATCG AGGCGGCGAC GTTCATCGCG
ACGCTGCAGA AGCGTCAGGG GCTCATGGTC GCGTGCCCCG AAGAGATCGC GTACCGCCGC
AACTGGATCG ACGCGGAGCA GGTGCTGAAA CTGGCACAGC CGCTCGCGAA GAACGCCTAC
GGGCTGTATC TCCGGAACCT ACTCACCCAT CAGGTCGCAT GGCAATCCAC GTAA
|
|---|
| Protein sequence | MARKGIILAG GSGTRLYPIT HAVSKQLLPV YDKPMIYYPL STLMIAGIRD VLIISTPQDT
PRFESMLGDG GQWGMNIRYA TQPSPDGLAQ AFVIGRDFVG NEPSALILGD NIFYGHDLAK
QLERASAKDA GATVFAYHVQ DPERYGVVEF DREFRAISIE EKPAKPRSSY AVTGLYFYDT
QVCDIAADIK PSARGELEIT DVNSRYLAAG QLDVELMGRG YAWLDTGTHD SLIEAATFIA
TLQKRQGLMV ACPEEIAYRR NWIDAEQVLK LAQPLAKNAY GLYLRNLLTH QVAWQST
|
|---|
| |