More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2677 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  100 
 
 
292 aa  600  1.0000000000000001e-171  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  82.52 
 
 
297 aa  504  9.999999999999999e-143  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  82.17 
 
 
297 aa  499  1e-140  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  81.12 
 
 
297 aa  494  1e-139  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_009080  BMA10247_1851  glucose-1-phosphate thymidylyltransferase  81.47 
 
 
297 aa  494  1e-139  Burkholderia mallei NCTC 10247  Bacteria  normal  0.530858  n/a   
 
 
-
 
NC_009076  BURPS1106A_3140  glucose-1-phosphate thymidylyltransferase  81.47 
 
 
297 aa  494  1e-139  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3162  glucose-1-phosphate thymidylyltransferase  81.47 
 
 
312 aa  495  1e-139  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  81.82 
 
 
297 aa  496  1e-139  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  81.47 
 
 
312 aa  496  1e-139  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  81.12 
 
 
297 aa  495  1e-139  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  81.47 
 
 
297 aa  497  1e-139  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3103  glucose-1-phosphate thymidylyltransferase  81.47 
 
 
297 aa  494  1e-139  Burkholderia pseudomallei 668  Bacteria  normal  0.0791129  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0924  glucose-1-phosphate thymidylyltransferase  81.47 
 
 
297 aa  494  1e-139  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2754  glucose-1-phosphate thymidylyltransferase  81.47 
 
 
297 aa  494  1e-139  Burkholderia mallei NCTC 10229  Bacteria  normal  0.119435  n/a   
 
 
-
 
NC_010682  Rpic_0639  glucose-1-phosphate thymidylyltransferase  79.17 
 
 
294 aa  492  9.999999999999999e-139  Ralstonia pickettii 12J  Bacteria  normal  normal  0.477683 
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  80.77 
 
 
297 aa  493  9.999999999999999e-139  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  79.86 
 
 
297 aa  492  9.999999999999999e-139  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  80.77 
 
 
297 aa  491  9.999999999999999e-139  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  77.85 
 
 
292 aa  491  9.999999999999999e-139  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1989  glucose-1-phosphate thymidylyltransferase  81.12 
 
 
297 aa  490  1e-137  Burkholderia mallei ATCC 23344  Bacteria  normal  0.112346  n/a   
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  78.32 
 
 
295 aa  489  1e-137  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  81.05 
 
 
297 aa  490  1e-137  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0752  glucose-1-phosphate thymidylyltransferase  79.72 
 
 
297 aa  488  1e-137  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0255  glucose-1-phosphate thymidylyltransferase  78.2 
 
 
309 aa  489  1e-137  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.201113  n/a   
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  77.43 
 
 
292 aa  485  1e-136  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  77.08 
 
 
305 aa  484  1e-136  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_010531  Pnec_0279  glucose-1-phosphate thymidylyltransferase  77.51 
 
 
309 aa  484  1e-136  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.643202  normal 
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  77.51 
 
 
292 aa  481  1e-135  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  77.35 
 
 
293 aa  479  1e-134  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  76.12 
 
 
296 aa  476  1e-133  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  74.57 
 
 
294 aa  474  1e-132  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  76.12 
 
 
293 aa  472  1e-132  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  74.83 
 
 
292 aa  468  1.0000000000000001e-131  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_010625  Bphy_6726  glucose-1-phosphate thymidylyltransferase  77.54 
 
 
317 aa  469  1.0000000000000001e-131  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  75.69 
 
 
292 aa  470  1.0000000000000001e-131  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  75.35 
 
 
296 aa  470  1.0000000000000001e-131  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  75.78 
 
 
293 aa  469  1.0000000000000001e-131  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  75.35 
 
 
296 aa  469  1.0000000000000001e-131  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  74.14 
 
 
292 aa  464  9.999999999999999e-131  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  73.97 
 
 
293 aa  465  9.999999999999999e-131  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  75.09 
 
 
293 aa  466  9.999999999999999e-131  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  73.45 
 
 
294 aa  464  9.999999999999999e-131  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  75.96 
 
 
293 aa  466  9.999999999999999e-131  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  74.14 
 
 
292 aa  464  9.999999999999999e-131  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  73.79 
 
 
294 aa  466  9.999999999999999e-131  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  73.45 
 
 
294 aa  464  9.999999999999999e-131  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  73.45 
 
 
294 aa  463  1e-129  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  73.36 
 
 
293 aa  461  1e-129  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  73.45 
 
 
295 aa  461  1e-129  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  74.14 
 
 
292 aa  461  1e-129  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  73.45 
 
 
294 aa  464  1e-129  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  72.41 
 
 
296 aa  459  9.999999999999999e-129  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3489  glucose-1-phosphate thymidylyltransferase  75.68 
 
 
295 aa  457  9.999999999999999e-129  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.374251 
 
 
-
 
NC_008825  Mpe_A0626  glucose-1-phosphate thymidylyltransferase  71.97 
 
 
294 aa  455  1e-127  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.353924 
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  73.26 
 
 
293 aa  454  1e-127  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  74.74 
 
 
299 aa  456  1e-127  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  72.41 
 
 
291 aa  452  1.0000000000000001e-126  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  73.17 
 
 
293 aa  450  1e-125  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_007760  Adeh_4290  glucose-1-phosphate thymidylyltransferase  71.38 
 
 
294 aa  445  1.0000000000000001e-124  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6254  glucose-1-phosphate thymidylyltransferase  70.83 
 
 
295 aa  445  1.0000000000000001e-124  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0696  glucose-1-phosphate thymidylyltransferase  70.93 
 
 
294 aa  445  1.0000000000000001e-124  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.53714  normal 
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  72.47 
 
 
294 aa  441  1e-123  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_007614  Nmul_A0266  glucose-1-phosphate thymidylyltransferase  74.91 
 
 
295 aa  441  1e-123  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.643913  n/a   
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  70.59 
 
 
293 aa  441  1e-123  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  71.97 
 
 
291 aa  443  1e-123  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
NC_007604  Synpcc7942_2101  glucose-1-phosphate thymidylyltransferase  69.93 
 
 
294 aa  437  9.999999999999999e-123  Synechococcus elongatus PCC 7942  Bacteria  normal  0.338319  normal 
 
 
-
 
NC_002947  PP_1783  glucose-1-phosphate thymidylyltransferase  72.22 
 
 
293 aa  436  1e-121  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00712451 
 
 
-
 
NC_011901  Tgr7_2342  glucose-1-phosphate thymidylyltransferase  70.28 
 
 
292 aa  434  1e-121  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01934  hypothetical protein  74.44 
 
 
270 aa  437  1e-121  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4445  glucose-1-phosphate thymidylyltransferase  71.97 
 
 
294 aa  435  1e-121  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4427  glucose-1-phosphate thymidylyltransferase  70.93 
 
 
294 aa  431  1e-120  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0403  glucose-1-phosphate thymidylyltransferase  67.71 
 
 
303 aa  433  1e-120  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.504553 
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  71.83 
 
 
291 aa  433  1e-120  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  70.88 
 
 
289 aa  428  1e-119  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_010717  PXO_03170  glucose-1-phosphate thymidylyltransferase  69.79 
 
 
295 aa  426  1e-118  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1494  glucose-1-phosphate thymidylyltransferase  70.18 
 
 
287 aa  426  1e-118  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1181  glucose-1-phosphate thymidylyltransferase  70.42 
 
 
289 aa  426  1e-118  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.25108  normal  0.28241 
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  68.28 
 
 
312 aa  426  1e-118  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1270  glucose-1-phosphate thymidylyltransferase  70.42 
 
 
289 aa  427  1e-118  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.106852  normal  0.0645307 
 
 
-
 
NC_007778  RPB_1565  glucose-1-phosphate thymidylyltransferase  68.64 
 
 
292 aa  425  1e-118  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.995779 
 
 
-
 
NC_011071  Smal_0504  glucose-1-phosphate thymidylyltransferase  69.1 
 
 
295 aa  424  1e-117  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0219924  normal  0.028839 
 
 
-
 
NC_011989  Avi_1983  glucose-1-phosphate thymidylyltransferase  69.82 
 
 
287 aa  423  1e-117  Agrobacterium vitis S4  Bacteria  normal  0.967411  n/a   
 
 
-
 
NC_010513  Xfasm12_0225  glucose-1-phosphate thymidylyltransferase  67.81 
 
 
295 aa  422  1e-117  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  68.75 
 
 
298 aa  424  1e-117  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  68.4 
 
 
298 aa  424  1e-117  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  68.4 
 
 
298 aa  424  1e-117  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1283  glucose-1-phosphate thymidylyltransferase  67.48 
 
 
295 aa  417  1e-116  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_0637  glucose-1-phosphate thymidylyltransferase, long form  67.59 
 
 
310 aa  418  1e-116  Synechococcus sp. CC9902  Bacteria  normal  0.210198  n/a   
 
 
-
 
NC_007794  Saro_3238  glucose-1-phosphate thymidylyltransferase  69.1 
 
 
301 aa  420  1e-116  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1574  glucose-1-phosphate thymidylyltransferase  67.94 
 
 
292 aa  421  1e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.446194 
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  67.13 
 
 
293 aa  417  1e-116  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0196  glucose-1-phosphate thymidylyltransferase  67.47 
 
 
295 aa  420  1e-116  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1406  glucose-1-phosphate thymidylyltransferase  67.6 
 
 
290 aa  419  1e-116  Magnetococcus sp. MC-1  Bacteria  normal  0.0680028  normal 
 
 
-
 
NC_011138  MADE_00988  glucose-1-phosphate thymidylyltransferase  67.6 
 
 
293 aa  419  1e-116  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0774  glucose-1-phosphate thymidylyltransferase, long form  67.25 
 
 
292 aa  416  9.999999999999999e-116  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
305 aa  415  9.999999999999999e-116  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2629  glucose-1-phosphate thymidylyltransferase  67.47 
 
 
298 aa  416  9.999999999999999e-116  Marinobacter aquaeolei VT8  Bacteria  normal  0.357597  n/a   
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
296 aa  411  1e-114  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_009511  Swit_4021  glucose-1-phosphate thymidylyltransferase  69.04 
 
 
289 aa  414  1e-114  Sphingomonas wittichii RW1  Bacteria  normal  0.401685  normal 
 
 
-
 
NC_009831  Ssed_3013  glucose-1-phosphate thymidylyltransferase  65.86 
 
 
296 aa  410  1e-114  Shewanella sediminis HAW-EB3  Bacteria  normal  0.515318  hitchhiker  0.00164401 
 
 
-
 
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