| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3386 |
|---|
| Symbol | |
|---|
| ID | 4312246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 184052 |
|---|
| End bp | 184948 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638151228 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_775274 |
|---|
| Protein GI | 115358136 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.718729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAG CGATTGGCCG TAAAGGACTG ATTCTGGCGG GCGGCTCGGG CACCCGGCTC
CATCCGCTCA CGCACTCGGT GTCGAAGCAA TTGATGCCGG TGTACGACAA ACCGATGATC
TATTACCCGC TCAGCACGAT CATGCTGTCG GGCATCCGCG ACGTGCTGGT CATCTCGACG
CCGCGCGATC TCGATGCCTT CCAGCAACTG CTCGGCGACG GCAGCCAGTG GGGCATGAAC
TTTTCGTATG CGGCGCAGCC GAGCCCCGAC GGTCTTGCCC AGGCGTTCGT GATCGGCGCG
CCGTTCATCG GTCGCGACGC GGCGACGCTC GTGCTCGGCG ACAACATCTA TCACGGGCCC
GCGCTGTCGT CGCTGCTGCA ACAAGCCGCC GCACGGACCG CCGGCGCGAC CGTGTTCGGC
TACTACGTGC GCGATCCGGA GCGCTACGGC GTCGTGTCGT TCGACGCGCA TGGCCGGGCG
ATCGACCTCG AGGAAAAACC GCGCGAGCCG AAGTCGCACT ATGCGGTCAC CGGCCTCTAT
TTCTACGACA ACGACGTCGT CGAATTGGCG AAGGCCGTGC GACCGTCCGC GCGCGGCGAA
CTGGAAATTA CCGACCTGAA TCTCGCGTAT CTCGCGCGCG GCGCGCTGAA TGTCGAGATA
CTCGGGCGCG GCTACGCATG GCTCGACACC GGCACGCACG AATCGTTGCT CGACGCGGCC
AATTTCATCC AGGTAATGCA GGCGCGGCAG GGCCTGCAAA TCGCGTGTCC CGAGGAAATC
GCGTACCGGC TCGGCTGGAT CGATGCGGAG CAGCTCGAAA CGCTCGCGCA CAAGCTCGCG
AAAAGCGGTT ACGGCCGCTA TCTGCTCGAT CTGCTGAGCA AGGAGGTCGC AGCATGA
|
|---|
| Protein sequence | MQTAIGRKGL ILAGGSGTRL HPLTHSVSKQ LMPVYDKPMI YYPLSTIMLS GIRDVLVIST
PRDLDAFQQL LGDGSQWGMN FSYAAQPSPD GLAQAFVIGA PFIGRDAATL VLGDNIYHGP
ALSSLLQQAA ARTAGATVFG YYVRDPERYG VVSFDAHGRA IDLEEKPREP KSHYAVTGLY
FYDNDVVELA KAVRPSARGE LEITDLNLAY LARGALNVEI LGRGYAWLDT GTHESLLDAA
NFIQVMQARQ GLQIACPEEI AYRLGWIDAE QLETLAHKLA KSGYGRYLLD LLSKEVAA
|
|---|
| |