Gene BMA1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1989 
SymbolrfbA 
ID3088145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp2087143 
End bp2088036 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content63% 
IMG OID637562636 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_103576 
Protein GI53725973 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.112346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCA AGGGCATTAT TCTGGCCGGC GGTTCCGGCA CGCGGCTGTA TCCGATCACG 
CATGCGGTGT CGAAGCAGCT GTTGCCGGTC TACGACAAGC CGATGATCTA TTACCCGCTG
TCGACGCTGA TGGTGGCGGA CATTCGCGAT GTGCTGATCA TCTCGACGCT GCAGGACACG
CCGCGCTTCG AGGCGATGCT GGGTGACGGC AGCCAGTGGG GGATGAACAT CCGCTACGCG
GTGCAGCCGT CGCCGGACGG GCTCGCGCAG GCGTTCGTGA TCGGCCGGGA ATTCGTCGGC
CGCGATCCGT CGACGCTGAT TCTCGGCGAC AACATCTTCT ATGGCCACGA TCTCGCGAAG
CAACTCGATC GGGCATCGGC GCGGCAGGCG GGTGCGACGG TGTTCGCATA CCACGTGCAC
GATCCGGAGC GCTACGGCGT CGTCGAGTTC GACGGCGAAT TCCGCGCGCT GTCGATCGAG
GAGAAGCCCG CGAAGCCGCG CTCGAACTAC GCGGTGACGG GGCTGTACTT CTACGACAAC
CAGGTGTGCG ACATCGCGGC GGACATCAAG CCGTCCGCGC GCGGCGAGCT GGAGATCACG
GACGTGAATT CCCGCTATCT CGCCGCGGGT TTGCTCGACG TCGAGATCAT GGGCCGCGGC
TACGCGTGGC TCGATACCGG CACGCACGAT TCGCTGATCG AGGCGGCGAC GTTCATCGCG
ACGCTGCAAA AGCGCCAGGG GCTCGTCGTC GCGTGTCCGG AGGAGATCGC GTATCGGCGG
CAGTGGATCG ACGCGGAACA ACTGCTCAAG CTCGCACAGC CTTTGTCGAA AAATGGCTAT
GGCCAGTACC TGAAAAACAT TCTTACGGAT CAAGTCGCAT GGCCATCCAA GTAA
 
Protein sequence
MARKGIILAG GSGTRLYPIT HAVSKQLLPV YDKPMIYYPL STLMVADIRD VLIISTLQDT 
PRFEAMLGDG SQWGMNIRYA VQPSPDGLAQ AFVIGREFVG RDPSTLILGD NIFYGHDLAK
QLDRASARQA GATVFAYHVH DPERYGVVEF DGEFRALSIE EKPAKPRSNY AVTGLYFYDN
QVCDIAADIK PSARGELEIT DVNSRYLAAG LLDVEIMGRG YAWLDTGTHD SLIEAATFIA
TLQKRQGLVV ACPEEIAYRR QWIDAEQLLK LAQPLSKNGY GQYLKNILTD QVAWPSK